RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 ZNF771Q7L3S4 317 aaPredicted RBP13.07□□□□□ -0.32
USP11-207ENST00000478596 NUP54Q7Z3B4 507 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 ZAR1Q86SH2 424 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 PTOV1Q86YD1 416 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 GATSQ8NAP1 163 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 MAPK1IP1LQ8NDC0 245 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 WDR60Q8WVS4 1066 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 SLC7A6OSQ96CW6 309 aaPredicted RBP13.07□□□□□ -0.32
USP11-207ENST00000478596 SGCZQ96LD1 299 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 JSRP1Q96MG2 331 aaPredicted RBP13.07□□□□□ -0.32
USP11-207ENST00000478596 TRIM15Q9C019 465 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 HOXD1Q9GZZ0 328 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 FBXO34Q9NWN3 711 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
USP11-207ENST00000478596 EGFL7Q9UHF1 273 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 MAGEL2Q9UJ55 1249 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 TESMINQ9Y4I5 508 aa13.07□□□□□ -0.32
USP11-207ENST00000478596 NINQ8N4C6 2090 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 TGP01266 2768 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 A0A0G2JPF8 293 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 PRORSD1PA6NEY8 169 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 A8MV72 311 aaPredicted RBP13.06□□□□□ -0.32
USP11-207ENST00000478596 HNRNPCL2B2RXH8 293 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 HNRNPCL3B7ZW38 293 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 RNF223E7ERA6 249 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 CXCR6O00574 342 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 SIAH2O43255 324 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 SERPINB7O75635 380 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 CYP7B1O75881 506 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 OXSR1O95747 527 aaPredicted RBP13.06□□□□□ -0.32
USP11-207ENST00000478596 IFNA14P01570 189 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 OPN1SWP03999 348 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 TFPTP0C1Z6 253 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 HNRNPCL4P0DMR1 293 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 NCK1P16333 377 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 IL7RP16871 459 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 ME2P23368 584 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 CCR4P51679 360 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 LARS2Q15031 903 aaKnown RBP13.06□□□□□ -0.32
USP11-207ENST00000478596 ZNF791Q3KP31 576 aaPredicted RBP13.06□□□□□ -0.32
USP11-207ENST00000478596 SPATS1Q496A3 300 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 LIN52Q52LA3 116 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 EIPR1Q53HC9 387 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 PDZK1Q5T2W1 519 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 PRAMEF8Q5VWM4 474 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 PRAMEF7Q5VXH5 474 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 SLC22A10Q63ZE4 541 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 TYW3Q6IPR3 259 aaKnown RBP13.06□□□□□ -0.32
USP11-207ENST00000478596 PATL1Q86TB9 770 aaKnown RBP13.06□□□□□ -0.32
USP11-207ENST00000478596 CALHM3Q86XJ0 350 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 ARMC8Q8IUR7 673 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 GOLM1Q8NBJ4 401 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 ROBO4Q8WZ75 1007 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 CLPTM1LQ96KA5 538 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 LRGUKQ96M69 825 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 ZNF583Q96ND8 569 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 DOHHQ9BU89 302 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 RBM24Q9BX46 236 aaKnown RBP13.06□□□□□ -0.32
USP11-207ENST00000478596 PLA2G12AQ9BZM1 189 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 QRSL1Q9H0R6 528 aaKnown RBP13.06□□□□□ -0.32
USP11-207ENST00000478596 SLC38A1Q9H2H9 487 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 ARMC7Q9H6L4 198 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 ACKR4Q9NPB9 350 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 UBQLN4Q9NRR5 601 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 GALNT8Q9NY28 637 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 C6orf203Q9P0P8 240 aaPredicted RBP13.06□□□□□ -0.32
USP11-207ENST00000478596 NDRG3Q9UGV2 375 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 CDC42EP3Q9UKI2 254 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 ABCG2Q9UNQ0 655 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 SNX13Q9Y5W8 968 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 ARHGAP21Q5T5U3 1957 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 ABCA1O95477 2261 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 SVEP1Q4LDE5 3571 aa13.06□□□□□ -0.32
USP11-207ENST00000478596 GTPBP1O00178 669 aaKnown RBP13.05□□□□□ -0.32
USP11-207ENST00000478596 NDUFB5O43674 189 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 GMFGO60234 142 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 FCMRO60667 390 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 TMCC2O75069 709 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 PGM3O95394 542 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 ZNF682O95780 498 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 DBIP07108 87 aaKnown RBP13.05□□□□□ -0.32
USP11-207ENST00000478596 CCL3P10147 92 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 HSD17B1P14061 328 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 MSX2P35548 267 aaPredicted RBP13.05□□□□□ -0.32
USP11-207ENST00000478596 ATP12AP54707 1039 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 CEACAM7Q14002 265 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 ADRM1Q16186 407 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 WIPI1Q5MNZ9 446 aaPredicted RBP13.05□□□□□ -0.32
USP11-207ENST00000478596 NSUN5P2Q63ZY6 315 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 BICRALQ6AI39 1079 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 DESI1Q6ICB0 168 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 LYPD8Q6UX82 237 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 OR52P1PQ8NH57 321 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 NEIL3Q8TAT5 605 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 PHOSPHO1Q8TCT1 267 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 HGDQ93099 445 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 ZNF597Q96LX8 424 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 RAB3IPQ96QF0 476 aaPredicted RBP13.05□□□□□ -0.32
USP11-207ENST00000478596 NODALQ96S42 347 aa13.05□□□□□ -0.32
USP11-207ENST00000478596 GALNT9Q9HCQ5 603 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms