RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 CLDN24A6NM45 220 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 CYTIPO60759 359 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 CYP7B1O75881 506 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 ATE1O95260 518 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 RAF1P04049 648 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 YES1P07947 543 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 TFPTP0C1Z6 253 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 BMP2P12643 396 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 ENPP1P22413 925 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 LOXP28300 417 aaPredicted RBP20.86■□□□□ 0.93
C9orf3-215ENST00000478473 IDH3AP50213 366 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 MERTKQ12866 999 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 SYT14P1Q58G82 188 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 TMEM201Q5SNT2 666 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 HDXQ7Z353 690 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 ARFGAP2Q8N6H7 521 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 CNOT9Q92600 299 aaKnown RBP20.86■□□□□ 0.93
C9orf3-215ENST00000478473 PSD2Q9BQI7 771 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 CALML5Q9NZT1 146 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 GPR52Q9Y2T5 361 aa20.86■□□□□ 0.93
C9orf3-215ENST00000478473 SMAD9O15198 467 aaKnown RBP20.85■□□□□ 0.93
C9orf3-215ENST00000478473 DNPH1O43598 174 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 DBIP07108 87 aaKnown RBP20.85■□□□□ 0.93
C9orf3-215ENST00000478473 NR2F1P10589 423 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 MAP2K6P52564 334 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 FBXW10Q5XX13 1052 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 TFAP2EQ6VUC0 442 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 FUNDC1Q8IVP5 155 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 TUSC5Q8IXB3 177 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 GABRG1Q8N1C3 465 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 PNPT1Q8TCS8 783 aaKnown RBP20.85■□□□□ 0.93
C9orf3-215ENST00000478473 VPS33AQ96AX1 596 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 PAIP1Q9H074 479 aaKnown RBP20.85■□□□□ 0.93
C9orf3-215ENST00000478473 SLC52A3Q9NQ40 469 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 KLHL9Q9P2J3 617 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 P2RX2Q9UBL9 471 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 CHRNA9Q9UGM1 479 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 PLEKHA6Q9Y2H5 1048 aa20.85■□□□□ 0.93
C9orf3-215ENST00000478473 SPIN1Q9Y657 262 aaPredicted RBP20.85■□□□□ 0.93
C9orf3-215ENST00000478473 MED13LQ71F56 2210 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 ZNF724A8MTY0 619 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 POLR3GO15318 223 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-215ENST00000478473 GCM2O75603 506 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-215ENST00000478473 THBDP07204 575 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 HTR3AP46098 478 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 DIO1P49895 249 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 GNA13Q14344 377 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 PDK3Q15120 406 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 ZSWIM7Q19AV6 140 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 BLOC1S3Q6QNY0 202 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 NUFIP2Q7Z417 695 aaKnown RBP20.84■□□□□ 0.93
C9orf3-215ENST00000478473 ADGRG3Q86Y34 549 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 ATP6V1C2Q8NEY4 427 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 SLC38A5Q8WUX1 472 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 WDR60Q8WVS4 1066 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 EBF4Q9BQW3 602 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 HDHD5Q9BXW7 423 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 CTPS2Q9NRF8 586 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 HDGFL3Q9Y3E1 203 aa20.84■□□□□ 0.93
C9orf3-215ENST00000478473 IGKV3D-15A0A087WSY6 115 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 PMS2P2O95744 297 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 ETFAP13804 333 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 CSNK2A1P68400 391 aaPredicted RBP20.83■□□□□ 0.93
C9orf3-215ENST00000478473 POU4F3Q15319 338 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 EXOC3L2Q2M3D2 409 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 GTDC1Q4AE62 458 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 LRIF1Q5T3J3 769 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 PRAMEF8Q5VWM4 474 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 PRAMEF7Q5VXH5 474 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 DNAJC14Q6Y2X3 702 aaPredicted RBP20.83■□□□□ 0.93
C9orf3-215ENST00000478473 ZNF550Q7Z398 422 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 PEX5LQ8IYB4 626 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 ZNF440Q8IYI8 595 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 ZNF563Q8TA94 476 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 OR5B2Q96R09 309 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 KLHL4Q9C0H6 718 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 C6orf203Q9P0P8 240 aaPredicted RBP20.83■□□□□ 0.93
C9orf3-215ENST00000478473 TRAPPC4Q9Y296 219 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 PCDHB14Q9Y5E9 798 aa20.83■□□□□ 0.93
C9orf3-215ENST00000478473 CDHR4A6H8M9 788 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 ZNF208O43345 1280 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 KLF4O43474 513 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 ANP32DO95626 131 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 THBS1P07996 1170 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 IL7RP16871 459 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 CD53P19397 219 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 RYKP34925 604 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 ATP4BP51164 291 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 CRISP3P54108 245 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 DSTNP60981 165 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 STX1BP61266 288 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 PPP2R2AP63151 447 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 EPS8Q12929 822 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 FADDQ13158 208 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 MRPL2Q5T653 305 aaKnown RBP20.82■□□□□ 0.92
C9orf3-215ENST00000478473 ABLIM2Q6H8Q1 611 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 HMGN2P46Q86SG4 172 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 MTDHQ86UE4 582 aaKnown RBP20.82■□□□□ 0.92
C9orf3-215ENST00000478473 CKAP2Q8WWK9 683 aa20.82■□□□□ 0.92
C9orf3-215ENST00000478473 AURKBQ96GD4 344 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms