RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 RIMS3Q9UJD0 308 aa13.72□□□□□ -0.21
MCF2L-224ENST00000475524 OSGIN1Q9UJX0 560 aa13.72□□□□□ -0.21
MCF2L-224ENST00000475524 VDAC3Q9Y277 283 aa13.72□□□□□ -0.21
MCF2L-224ENST00000475524 AP4B1Q9Y6B7 739 aa13.72□□□□□ -0.21
MCF2L-224ENST00000475524 A0A087WUJ7 227 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 OR2M5A3KFT3 312 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 OR14I1A6ND48 311 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 CPSF4LA6NMK7 179 aaKnown RBP13.71□□□□□ -0.21
MCF2L-224ENST00000475524 GJE1A6NN92 205 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 ANKRD65E5RJM6 399 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 hCG_2039718K7EN88 272 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 FFAR1O14842 300 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 DEAF1O75398 565 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-224ENST00000475524 TRAPPC6AO75865 159 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 H1F0P07305 194 aaKnown RBP13.71□□□□□ -0.21
MCF2L-224ENST00000475524 FREM3P0C091 2139 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 TACR3P29371 465 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 RFC3P40938 356 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 HMGA2P52926 109 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 MERTKQ12866 999 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 TRAM2Q15035 370 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 TOMM20Q15388 145 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 CMPK2Q5EBM0 449 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 COLEC12Q5KU26 742 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 RAET1LQ5VY80 246 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 OR2T5Q6IEZ7 315 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 C3orf33Q6P1S2 294 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 LINC00114Q6XXX2 140 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 TRILQ7L0X0 811 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 OR2T29Q8NH02 315 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 POC1BQ8TC44 478 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 FAR1Q8WVX9 515 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 STMN2Q93045 179 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 SLC41A3Q96GZ6 507 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 GPR137Q96N19 417 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 TMEM43Q9BTV4 400 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 NMNAT1Q9HAN9 279 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-224ENST00000475524 DNAJB9Q9UBS3 223 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 CHRNA9Q9UGM1 479 aa13.71□□□□□ -0.21
MCF2L-224ENST00000475524 TMED7-TICAM2A0A0A6YYA0 188 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 TRGV5A0A0B4J1U4 118 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 ELOA3DA6NLF2 546 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-224ENST00000475524 AQP7O14520 342 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 GMFGO60234 142 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 ENTPD5O75356 428 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 LYPD3O95274 346 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 CXCR1P25024 350 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 FASP25445 335 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 CDH12P55289 794 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 RAC1P63000 192 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 ELF3P78545 371 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-224ENST00000475524 PIN1Q13526 163 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-224ENST00000475524 ELOA3BQ3SY89 546 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 WIPI1Q5MNZ9 446 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-224ENST00000475524 GDF7Q7Z4P5 450 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 TSPYL5Q86VY4 417 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-224ENST00000475524 ADGRG3Q86Y34 549 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 LINC00471Q8N535 108 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 ELOA3Q8NG57 546 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 OR6S1Q8NH40 331 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 STK35Q8TDR2 534 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 ZNF524Q96C55 264 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 SFXN2Q96NB2 322 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 SLX1AQ9BQ83 275 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 S100A14Q9HCY8 104 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 SLC7A7Q9UM01 511 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 TMED7Q9Y3B3 224 aa13.7□□□□□ -0.22
MCF2L-224ENST00000475524 GADD45GO95257 159 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 CST1P01037 141 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 THY1P04216 161 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 PEPDP12955 493 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 ATP6AP1Q15904 470 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 ARHGAP11AQ6P4F7 1023 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 YRDCQ86U90 279 aaKnown RBP13.69□□□□□ -0.22
MCF2L-224ENST00000475524 RNF113BQ8IZP6 322 aaKnown RBP13.69□□□□□ -0.22
MCF2L-224ENST00000475524 GHDCQ8N2G8 530 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 ACOT11Q8WXI4 607 aaPredicted RBP13.69□□□□□ -0.22
MCF2L-224ENST00000475524 SNRNP40Q96DI7 357 aaKnown RBP13.69□□□□□ -0.22
MCF2L-224ENST00000475524 EPYCQ99645 322 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 PRSS27Q9BQR3 290 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 PRR14Q9BWN1 585 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 POTEKPQ9BYX7 375 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 REEP1Q9H902 201 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 CTPS2Q9NRF8 586 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 MAN2C1Q9NTJ4 1040 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 NTNG1Q9Y2I2 539 aa13.69□□□□□ -0.22
MCF2L-224ENST00000475524 ATMQ13315 3056 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 A8MVM7 634 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 H0YHG0 523 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 H3BNX3 289 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 J3KTA2 159 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 CLOCKO15516 846 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 FZD7O75084 574 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 NPIPB7O75200 414 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 LDLRP01130 860 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 CELA3AP09093 270 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 RRM2P31350 389 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 LIMS1P48059 325 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 TDGF1P3P51864 188 aa13.68□□□□□ -0.22
MCF2L-224ENST00000475524 SPIBQ01892 262 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms