RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 SLC39A3Q9BRY0 314 aa21.47■■□□□ 1.03
CPNE1-223ENST00000475146 CCDC106Q9BWC9 280 aa21.47■■□□□ 1.03
CPNE1-223ENST00000475146 TMEM120AQ9BXJ8 343 aa21.47■■□□□ 1.03
CPNE1-223ENST00000475146 A4GALTQ9NPC4 353 aa21.47■■□□□ 1.03
CPNE1-223ENST00000475146 RLIMQ9NVW2 624 aa21.47■■□□□ 1.03
CPNE1-223ENST00000475146 VAPAQ9P0L0 249 aa21.47■■□□□ 1.03
CPNE1-223ENST00000475146 ZNF443Q9Y2A4 671 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-223ENST00000475146 APCP25054 2843 aa21.47■■□□□ 1.03
CPNE1-223ENST00000475146 SH3D21A4FU49 640 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 CFAP73A6NFT4 308 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 A6NNC1 897 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 C5orf58C9J3I9 102 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 UQCRBP14927 111 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 LARS2Q15031 903 aaKnown RBP21.46■■□□□ 1.03
CPNE1-223ENST00000475146 RNPS1Q15287 305 aaKnown RBP21.46■■□□□ 1.03
CPNE1-223ENST00000475146 EXOC3L2Q2M3D2 409 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 FBXW10Q5XX13 1052 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 FCRLAQ7L513 359 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 CDH24Q86UP0 819 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 POLDIP3Q9BY77 421 aaKnown RBP21.46■■□□□ 1.03
CPNE1-223ENST00000475146 ZNF385DQ9H6B1 395 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 FGFR1OP2Q9NVK5 253 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 ELOVL5Q9NYP7 299 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 CHRNA9Q9UGM1 479 aa21.46■■□□□ 1.03
CPNE1-223ENST00000475146 LEF1Q9UJU2 399 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-223ENST00000475146 IGHV3-15A0A0B4J1V0 119 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 A0A0G2JPF8 293 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 HNRNPCL2B2RXH8 293 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 HNRNPCL3B7ZW38 293 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 HNRNPCL1O60812 293 aaKnown RBP21.45■■□□□ 1.02
CPNE1-223ENST00000475146 VIMP08670 466 aaKnown RBP21.45■■□□□ 1.02
CPNE1-223ENST00000475146 HNRNPCL4P0DMR1 293 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 BMP2P12643 396 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 CCNA2P20248 432 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 AGTR1P30556 359 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 RAC3P60763 192 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 TMEM201Q5SNT2 666 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 GCNT6Q5T4J0 391 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 ZNF440Q8IYI8 595 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 DACH2Q96NX9 599 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 CLEC4MQ9H2X3 399 aaPredicted RBP21.45■■□□□ 1.02
CPNE1-223ENST00000475146 C12orf49Q9H741 205 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 NDRG3Q9UGV2 375 aa21.45■■□□□ 1.02
CPNE1-223ENST00000475146 CDHR4A6H8M9 788 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 ANGPT2O15123 496 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 THBS1P07996 1170 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 ENPP1P22413 925 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 HTR3AP46098 478 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 SF3A3Q12874 501 aaKnown RBP eCLIP21.44■■□□□ 1.029e-8■□□□□ 11.1
CPNE1-223ENST00000475146 EPS8Q12929 822 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 DAZAP2Q15038 168 aaPredicted RBP21.44■■□□□ 1.02
CPNE1-223ENST00000475146 BBS10Q8TAM1 723 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 MED4Q9NPJ6 270 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 PLSCR4Q9NRQ2 329 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 RASSF1Q9NS23 344 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 KLHL13Q9P2N7 655 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 ZNF232Q9UNY5 417 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 NDUFAF1Q9Y375 327 aa21.44■■□□□ 1.02
CPNE1-223ENST00000475146 MPDZO75970 2070 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 TRBV5-3A0A0A0MS03 114 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 ENO4A6NNW6 628 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 SULT2B1O00204 365 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 PRKD3O94806 890 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 GKN3PP0CG01 181 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 UGT2B10P36537 528 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 DIO1P49895 249 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 POLR2HP52434 150 aaKnown RBP21.43■■□□□ 1.02
CPNE1-223ENST00000475146 CSNK2A1P68400 391 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-223ENST00000475146 GUCY1A3Q02108 690 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 RNF220Q5VTB9 566 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 PRAMEF8Q5VWM4 474 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 PRAMEF7Q5VXH5 474 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 METTL21CQ5VZV1 264 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 TMPPEQ6ZT21 453 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 DHDDSQ86SQ9 333 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 STK32CQ86UX6 486 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 SLC43A2Q8N370 569 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 NFKBIDQ8NI38 313 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 DNAJA3Q96EY1 480 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 KLHL4Q9C0H6 718 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 ARMC7Q9H6L4 198 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 ITGB1BP2Q9UKP3 347 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 CORO2BQ9UQ03 480 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 IFT52Q9Y366 437 aa21.43■■□□□ 1.02
CPNE1-223ENST00000475146 TMED7-TICAM2A0A0A6YYA0 188 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 EVPLLA8MZ36 301 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 C16orf97H3BN30 126 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 FAAHO00519 579 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 CASKO14936 926 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 FESP07332 822 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 TACR3P29371 465 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 CCKARP32238 428 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 PCYT1AP49585 367 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 ZSWIM7Q19AV6 140 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 ZNF311Q5JNZ3 666 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 ADGRG3Q86Y34 549 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 TUSC5Q8IXB3 177 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 C10orf111Q8N326 155 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 SPATA9Q9BWV2 254 aa21.42■■□□□ 1.02
CPNE1-223ENST00000475146 OR11A1Q9GZK7 315 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms