RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 CCDC81Q6ZN84 652 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 LSRQ86X29 649 aaPredicted RBP18.09■□□□□ 0.49
SSR1-204ENST00000474597 OR11G2Q8NGC1 345 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 B4GALNT2Q8NHY0 566 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 HGDQ93099 445 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 SGTBQ96EQ0 304 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 LRFN3Q9BTN0 628 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 MMP25Q9NPA2 562 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 IL20RAQ9UHF4 553 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 A0A1W2PNU3 283 aaPredicted RBP18.08■□□□□ 0.48
SSR1-204ENST00000474597 H3BSA7 217 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 SOCS6O14544 535 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 CH25HO95992 272 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 HMGN1P05114 100 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 SSPNQ14714 243 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 OCLNQ16625 522 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 SMARCD3Q6STE5 483 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 MRGPREQ86SM8 312 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 ATG4DQ86TL0 474 aaPredicted RBP18.08■□□□□ 0.48
SSR1-204ENST00000474597 FAM26EQ8N5C1 309 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 SLC15A4Q8N697 577 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 OR4Q3Q8NH05 313 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 SLC19A3Q9BZV2 496 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 GPR83Q9NYM4 423 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 ICAM5Q9UMF0 924 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 PCDHGB1Q9Y5G3 927 aa18.08■□□□□ 0.48
SSR1-204ENST00000474597 FADS2O95864 444 aaKnown RBP18.07■□□□□ 0.48
SSR1-204ENST00000474597 GP1BBP13224 206 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 PCMT1P22061 227 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 EMX1Q04741 257 aaPredicted RBP18.07■□□□□ 0.48
SSR1-204ENST00000474597 C17orf67Q0P5P2 114 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 OR51A7Q8NH64 312 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 TMEM163Q8TC26 289 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 DUSP19Q8WTR2 217 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 LRR1Q96L50 414 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 RASL10BQ96S79 203 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 SPRY4Q9C004 299 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 RBM38Q9H0Z9 239 aaKnown RBP18.07■□□□□ 0.48
SSR1-204ENST00000474597 C12orf10Q9HB07 376 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 ZNF160Q9HCG1 818 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 FKBP14Q9NWM8 211 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 CNOT2Q9NZN8 540 aaKnown RBP18.07■□□□□ 0.48
SSR1-204ENST00000474597 KLRF1Q9NZS2 232 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 SIGLEC7Q9Y286 467 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 RPL36Q9Y3U8 105 aaKnown RBP18.07■□□□□ 0.48
SSR1-204ENST00000474597 CEPT1Q9Y6K0 416 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 SDK2Q58EX2 2172 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 TRAV27A0A087WT01 109 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 SNTNA6NMZ2 147 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 TNFSF15O95150 251 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 CDK1P06493 297 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 TACR3P29371 465 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 MVKQ03426 396 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 NLGN4YQ8NFZ3 816 aaPredicted RBP18.07■□□□□ 0.48
SSR1-204ENST00000474597 RORBQ92753 470 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 TMEM43Q9BTV4 400 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 COL25A1Q9BXS0 654 aaPredicted RBP18.07■□□□□ 0.48
SSR1-204ENST00000474597 UBQLN3Q9H347 655 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 HHATLQ9HCP6 504 aa18.07■□□□□ 0.48
SSR1-204ENST00000474597 HTR3EA5X5Y0 456 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 C17orf51A8MQB3 221 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 ITGA10O75578 1167 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 CELA2AP08217 269 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 FBXO45P0C2W1 286 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 NBL1P41271 181 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 MAP2K4P45985 399 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 MLLT10P55197 1068 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 ST3GAL4Q11206 333 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 CNPY1Q3B7I2 92 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 SLC25A30Q5SVS4 291 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 CLVS1Q8IUQ0 354 aaPredicted RBP18.06■□□□□ 0.48
SSR1-204ENST00000474597 IFT27Q9BW83 186 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 METTL7AQ9H8H3 244 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 MED17Q9NVC6 651 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 GPR52Q9Y2T5 361 aa18.06■□□□□ 0.48
SSR1-204ENST00000474597 ZNF99A8MXY4 864 aaPredicted RBP18.05■□□□□ 0.48
SSR1-204ENST00000474597 SURF4O15260 269 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 CDC40O60508 579 aaKnown RBP eCLIP18.05■□□□□ 0.48
SSR1-204ENST00000474597 STSP08842 583 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 ICAM2P13598 275 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 CXCR1P25024 350 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 SLC9A3P48764 834 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 TUBA3CQ13748 450 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 COL28A1Q2UY09 1125 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 RTL4Q6ZR62 310 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 BCDIN3DQ7Z5W3 292 aaKnown RBP18.05■□□□□ 0.48
SSR1-204ENST00000474597 OR13F1Q8NGS4 319 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 MUL1Q969V5 352 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 SPACA9Q96E40 222 aaPredicted RBP18.05■□□□□ 0.48
SSR1-204ENST00000474597 LHPPQ9H008 270 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 ADAM19Q9H013 955 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 SDHAF3Q9NRP4 125 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 TAS2R10Q9NYW0 307 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 RSL24D1Q9UHA3 163 aaKnown RBP18.05■□□□□ 0.48
SSR1-204ENST00000474597 MPDZO75970 2070 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 OTOGLQ3ZCN5 2332 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 A0A1W2PQ72 361 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 OR7A10O76100 309 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 FTH1P19P0C7X4 201 aa18.05■□□□□ 0.48
SSR1-204ENST00000474597 MST1P26927 711 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms