RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TMPPEQ6ZT21 453 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 Q6ZT83 130 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 SSX8Q7RTT4 187 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 ZNF611Q8N823 705 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 ZNF563Q8TA94 476 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 ZHX1-C8orf76Q96EF9 292 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 Q96MF0 132 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 ZBTB18Q99592 522 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 ESRP2Q9H6T0 727 aaKnown RBP18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 EXOSC3Q9NQT5 275 aaKnown RBP18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 AIG1Q9NVV5 245 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 LIPT1Q9Y234 373 aa18.08■□□□□ 0.48
PDLIM4-206ENST00000474421 TRPC5OSA6NMA1 111 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 SMAD9O15198 467 aaKnown RBP18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 CNOT4O95628 575 aaKnown RBP18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 PTH2RP49190 550 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 DIO1P49895 249 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 KCNJ10P78508 379 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 ALKBH2Q6NS38 261 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 FRRS1Q6ZNA5 592 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 OLIG3Q7RTU3 272 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 GRINAQ7Z429 371 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 ARFGAP2Q8N6H7 521 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 COX4I2Q96KJ9 171 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 TRNT1Q96Q11 434 aaKnown RBP18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 PANX1Q96RD7 426 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 POTEKPQ9BYX7 375 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 THAP1Q9NVV9 213 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 EMC3Q9P0I2 261 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 CHRNA9Q9UGM1 479 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 ING1Q9UK53 422 aaPredicted RBP18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 RNF115Q9Y4L5 304 aa18.07■□□□□ 0.48
PDLIM4-206ENST00000474421 CCDC154A6NI56 674 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 ZNF814B7Z6K7 855 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 SDHDO14521 159 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 HDAC3O15379 428 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 PLAUP00749 431 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 PGRP06401 933 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 CD3EP07766 207 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 TFPIP10646 304 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 CLK1P49759 484 aaKnown RBP18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 UFM1P61960 85 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 LTBQ06643 244 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 FUT5Q11128 374 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 ADAM5Q6NVV9 412 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 BHLHA15Q7RTS1 189 aaPredicted RBP18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 GALNT5Q7Z7M9 940 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 MTDHQ86UE4 582 aaKnown RBP18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 RNF130Q86XS8 419 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 CMIPQ8IY22 773 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 ANKRD42Q8N9B4 389 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 GLB1L3Q8NCI6 653 aaPredicted RBP18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 IGFBPL1Q8WX77 278 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 AKAP1Q92667 903 aaKnown RBP eCLIP18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 OR52E6Q96RD3 313 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 SMR3AQ99954 134 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 CCDC106Q9BWC9 280 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 HDGFL3Q9Y3E1 203 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 USF3Q68DE3 2245 aa18.06■□□□□ 0.48
PDLIM4-206ENST00000474421 NSD1Q96L73 2696 aaPredicted RBP18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 SLCO1B7G3V0H7 640 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 H7C1Q1 480 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 HMGN4O00479 90 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 DNPH1O43598 174 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 HEXAP06865 529 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 FESP07332 822 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 ALDOCP09972 364 aaKnown RBP18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 RYKP34925 604 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 MAGEA8P43361 318 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 HTR3AP46098 478 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 NME5P56597 212 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 CHRNEQ04844 493 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 GNA13Q14344 377 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 CAPRIN1Q14444 709 aaKnown RBP18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 PDK3Q15120 406 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 TSC22D1Q15714 1073 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 TAB1Q15750 504 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 ZNF100Q8IYN0 542 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 PMM1Q92871 262 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 TEX37Q96LM6 180 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 CTPS2Q9NRF8 586 aa18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 ZNF701Q9NV72 531 aaPredicted RBP18.05■□□□□ 0.48
PDLIM4-206ENST00000474421 IGKV3D-15A0A087WSY6 115 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 TMEM120BA0PK00 339 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 PMS2P2O95744 297 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 SLC18A1P54219 525 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 NCMAPQ5T1S8 102 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 ATG16L1Q676U5 607 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 ABLIM2Q6H8Q1 611 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 ZNF621Q6ZSS3 439 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 P2RY8Q86VZ1 359 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 RAB3IL1Q8TBN0 382 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 ZNF75CPQ92670 426 aaPredicted RBP18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 ZG16BQ96DA0 208 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 ZNF300Q96RE9 604 aaPredicted RBP18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 MTHFD2LQ9H903 347 aaPredicted RBP18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 GPR45Q9Y5Y3 372 aa18.04■□□□□ 0.48
PDLIM4-206ENST00000474421 AGAP5A6NIR3 686 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 GPR171O14626 319 aa18.03■□□□□ 0.48
PDLIM4-206ENST00000474421 SNNO75324 88 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms