RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 HIST3H2AQ7L7L0 130 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 MDGA2Q7Z553 956 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 NKAIN4Q8IVV8 208 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 NRMQ8IXM6 262 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 HS3ST5Q8IZT8 346 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 FDCSPQ8NFU4 85 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 OR2M3Q8NG83 312 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 OR14L1PQ8NHC6 308 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 TEX47Q8TBZ9 253 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 GPR119Q8TDV5 335 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 ZCCHC14Q8WYQ9 949 aaKnown RBP9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 HIST1H2ACQ93077 130 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 C3orf49Q96BT1 292 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 FAM46AQ96IP4 442 aaKnown RBP9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 MRGPRX4Q96LA9 322 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 PSD2Q9BQI7 771 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 MED17Q9NVC6 651 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 PLA2G3Q9NZ20 509 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 RAB26Q9ULW5 256 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 DOCK10Q96BY6 2186 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 PCSK5Q92824 1860 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 A0A087WUJ7 227 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 A0A087WUU8 490 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TMED7-TICAM2A0A0A6YYA0 188 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 GJE1A6NN92 205 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 ENO4A6NNW6 628 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 EFCAB9A8MZ26 197 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 SUSD5O60279 629 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 NME2P1O60361 137 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TRAPPC6AO75865 159 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 SP1P08047 785 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 ACADSP16219 412 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 PRKCAP17252 672 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 BMP7P18075 431 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 PTNP21246 168 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 NME2P22392 152 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 FKBP2P26885 142 aaKnown RBP9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 POU1F1P28069 291 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 LIMS1P48059 325 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 GAS1P54826 345 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 PPP2R2BQ00005 443 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 FOXF1Q12946 379 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 KCNAB2Q13303 367 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 MED21Q13503 144 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 ZIK1Q3SY52 487 aaPredicted RBP9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TIGD3Q6B0B8 471 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 FAHD1Q6P587 224 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 UNQ6494/PRO21346Q6UXR6 183 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TSEN54Q7Z6J9 526 aaKnown RBP9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TMEM179BQ7Z7N9 219 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 SLC22A16Q86VW1 577 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 SETD9Q8NE22 299 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 ATP6V1C2Q8NEY4 427 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 OR2M7Q8NG81 312 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 SLC25A43Q8WUT9 341 aaPredicted RBP9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 RNF138Q8WVD3 245 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 HAS2Q92819 552 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 BPIFA2Q96DR5 249 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 SGTBQ96EQ0 304 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 C1GALT1C1Q96EU7 318 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 SLC29A1Q99808 456 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 APOL4Q9BPW4 351 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 PIGQQ9BRB3 760 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TMEM43Q9BTV4 400 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 ADI1Q9BV57 179 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TAPBPLQ9BX59 468 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 DGCR6LQ9BY27 220 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 ZNF552Q9H707 407 aaPredicted RBP9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 EXO5Q9H790 373 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 ZFP64Q9NPA5 681 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 MAN2C1Q9NTJ4 1040 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TBC1D23Q9NUY8 699 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 IMPAD1Q9NX62 359 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 CHRNA9Q9UGM1 479 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 RAXQ9Y2V3 346 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TMED7Q9Y3B3 224 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 MAGED1Q9Y5V3 778 aaPredicted RBP9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 SPEGQ15772 3267 aa9.34□□□□□ -0.91
PRPF38A-202ENST00000474048 TMEM8BA6NDV4 472 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 UNC119BA6NIH7 251 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 A8MVM7 634 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 K7ENP7 123 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 BCKDKO14874 412 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 OR2T1O43869 369 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 PIP5K1CO60331 668 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 HCN1O60741 890 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 SEMA7AO75326 666 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 NEURL1O76050 574 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 RCBTB2O95199 551 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 OR6A2O95222 327 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 SNAP29O95721 258 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 GASTP01350 101 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF17P17021 662 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF26P17031 533 aaPredicted RBP9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 CBLP22681 906 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 FPR3P25089 353 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 ELK4P28324 431 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 ADH6P28332 368 aa9.33□□□□□ -0.92
PRPF38A-202ENST00000474048 SRD5A2P31213 254 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms