RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 AURKBQ96GD4 344 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-226ENST00000473066 ARMC7Q9H6L4 198 aa13.93□□□□□ -0.18
MRPL55-226ENST00000473066 GP6Q9HCN6 339 aa13.93□□□□□ -0.18
MRPL55-226ENST00000473066 SLC6A13Q9NSD5 602 aa13.93□□□□□ -0.18
MRPL55-226ENST00000473066 CCDC167Q9P0B6 97 aa13.93□□□□□ -0.18
MRPL55-226ENST00000473066 KLHL13Q9P2N7 655 aa13.93□□□□□ -0.18
MRPL55-226ENST00000473066 CHRNA9Q9UGM1 479 aa13.93□□□□□ -0.18
MRPL55-226ENST00000473066 ST6GALNAC2Q9UJ37 374 aa13.93□□□□□ -0.18
MRPL55-226ENST00000473066 PDZD2O15018 2839 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 A0A096LPI6 279 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 C5orf58C9J3I9 102 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 SULT2B1O00204 365 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 NID1P14543 1247 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 CD1EP15812 388 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 RPS4Y1P22090 263 aaKnown RBP13.92□□□□□ -0.18
MRPL55-226ENST00000473066 PPIBP23284 216 aaKnown RBP13.92□□□□□ -0.18
MRPL55-226ENST00000473066 FKBP2P26885 142 aaKnown RBP13.92□□□□□ -0.18
MRPL55-226ENST00000473066 CCKARP32238 428 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 ATP4BP51164 291 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 ART1P52961 327 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 FADDQ13158 208 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 LARS2Q15031 903 aaKnown RBP13.92□□□□□ -0.18
MRPL55-226ENST00000473066 MRPL2Q5T653 305 aaKnown RBP13.92□□□□□ -0.18
MRPL55-226ENST00000473066 AP1ARQ63HQ0 302 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 GTF2H4Q92759 462 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 ZG16BQ96DA0 208 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 TMEM19Q96HH6 336 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 RABEP2Q9H5N1 569 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 CTPS2Q9NRF8 586 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 PLSCR4Q9NRQ2 329 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 TRIM33Q9UPN9 1127 aa13.92□□□□□ -0.18
MRPL55-226ENST00000473066 IGHV3-15A0A0B4J1V0 119 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 CFAP73A6NFT4 308 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 CLDN24A6NM45 220 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 CLIC1O00299 241 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 BCAS1O75363 584 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-226ENST00000473066 HRGP04196 525 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 PPP3CBP16298 524 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 IDH2P48735 452 aaKnown RBP13.91□□□□□ -0.18
MRPL55-226ENST00000473066 ZSWIM7Q19AV6 140 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 AGKQ53H12 422 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 PAMR1Q6UXH9 720 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 ZNF550Q7Z398 422 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 OR52P1PQ8NH57 321 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 ZC3HAV1LQ96H79 300 aaKnown RBP13.91□□□□□ -0.18
MRPL55-226ENST00000473066 WFIKKN1Q96NZ8 548 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 PAIP1Q9H074 479 aaKnown RBP13.91□□□□□ -0.18
MRPL55-226ENST00000473066 TMEM45AQ9NWC5 275 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 ZNF232Q9UNY5 417 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 PLEKHA6Q9Y2H5 1048 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 PCDHB14Q9Y5E9 798 aa13.91□□□□□ -0.18
MRPL55-226ENST00000473066 A0A0G2JPF8 293 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 HNRNPCL2B2RXH8 293 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 HNRNPCL3B7ZW38 293 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 AP3D1O14617 1153 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 HNRNPCL1O60812 293 aaKnown RBP13.9□□□□□ -0.18
MRPL55-226ENST00000473066 FESP07332 822 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 YES1P07947 543 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 HNRNPCL4P0DMR1 293 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 NCF2P19878 526 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-226ENST00000473066 CCNA2P20248 432 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 DIO1P49895 249 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 POLR2HP52434 150 aaKnown RBP13.9□□□□□ -0.18
MRPL55-226ENST00000473066 MVDP53602 400 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 COPZ1P61923 177 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 RASGEF1BQ0VAM2 473 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 KEAP1Q14145 624 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 ANKRD34AQ69YU3 496 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 BLOC1S3Q6QNY0 202 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 TMPPEQ6ZT21 453 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 TUSC5Q8IXB3 177 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 BBS10Q8TAM1 723 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 SLC38A5Q8WUX1 472 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 STON2Q8WXE9 905 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 ZNF524Q96C55 264 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 DDIT4LQ96D03 193 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 THOC1Q96FV9 657 aaKnown RBP13.9□□□□□ -0.18
MRPL55-226ENST00000473066 SIKE1Q9BRV8 207 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 CCDC106Q9BWC9 280 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 NPHS2Q9NP85 383 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 EMC3Q9P0I2 261 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-226ENST00000473066 CORO2BQ9UQ03 480 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 ZNF443Q9Y2A4 671 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-226ENST00000473066 IFT52Q9Y366 437 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 HDGFL3Q9Y3E1 203 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 MED13LQ71F56 2210 aa13.9□□□□□ -0.18
MRPL55-226ENST00000473066 DSPPQ9NZW4 1301 aa13.9□□□□□ -0.19
MRPL55-226ENST00000473066 F8P00451 2351 aa13.89□□□□□ -0.19
MRPL55-226ENST00000473066 TMED7-TICAM2A0A0A6YYA0 188 aa13.89□□□□□ -0.19
MRPL55-226ENST00000473066 FAAHO00519 579 aa13.89□□□□□ -0.19
MRPL55-226ENST00000473066 SMAD9O15198 467 aaKnown RBP13.89□□□□□ -0.19
MRPL55-226ENST00000473066 DNPH1O43598 174 aa13.89□□□□□ -0.19
MRPL55-226ENST00000473066 CYTIPO60759 359 aa13.89□□□□□ -0.19
MRPL55-226ENST00000473066 RAF1P04049 648 aa13.89□□□□□ -0.19
MRPL55-226ENST00000473066 THBS1P07996 1170 aa13.89□□□□□ -0.19
MRPL55-226ENST00000473066 TFPTP0C1Z6 253 aa13.89□□□□□ -0.19
MRPL55-226ENST00000473066 CRYGSP22914 178 aa13.89□□□□□ -0.19
MRPL55-226ENST00000473066 IL32P24001 234 aa13.89□□□□□ -0.19
MRPL55-226ENST00000473066 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms