RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CALHM2Q9HA72 323 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 TMEM27Q9HBJ8 222 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 GMPR2Q9P2T1 348 aaKnown RBP18.01■□□□□ 0.47
SF1-213ENST00000472725 TNFRSF10DQ9UBN6 386 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 CHRNA9Q9UGM1 479 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 TINAGQ9UJW2 476 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 SAMD4AQ9UPU9 718 aaKnown RBP18.01■□□□□ 0.47
SF1-213ENST00000472725 SLC5A6Q9Y289 635 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 SNX13Q9Y5W8 968 aa18.01■□□□□ 0.47
SF1-213ENST00000472725 PHF3Q92576 2039 aaKnown RBP18■□□□□ 0.47
SF1-213ENST00000472725 CD8B2A6NJW9 211 aa18■□□□□ 0.47
SF1-213ENST00000472725 SHISA8B8ZZ34 492 aa18■□□□□ 0.47
SF1-213ENST00000472725 ZNF208O43345 1280 aa18■□□□□ 0.47
SF1-213ENST00000472725 TACR3P29371 465 aa18■□□□□ 0.47
SF1-213ENST00000472725 SWT1Q5T5J6 900 aaKnown RBP18■□□□□ 0.47
SF1-213ENST00000472725 C1orf185Q5T7R7 199 aa18■□□□□ 0.47
SF1-213ENST00000472725 ZNF613Q6PF04 617 aa18■□□□□ 0.47
SF1-213ENST00000472725 ULK3Q6PHR2 472 aa18■□□□□ 0.47
SF1-213ENST00000472725 ADGRE4PQ86SQ3 457 aa18■□□□□ 0.47
SF1-213ENST00000472725 GGNQ86UU5 652 aa18■□□□□ 0.47
SF1-213ENST00000472725 ADGRG3Q86Y34 549 aa18■□□□□ 0.47
SF1-213ENST00000472725 KLHL15Q96M94 604 aa18■□□□□ 0.47
SF1-213ENST00000472725 CTPS2Q9NRF8 586 aa18■□□□□ 0.47
SF1-213ENST00000472725 DCAF13Q9NV06 445 aaKnown RBP18■□□□□ 0.47
SF1-213ENST00000472725 RPS6KB2Q9UBS0 482 aa18■□□□□ 0.47
SF1-213ENST00000472725 EGFL7Q9UHF1 273 aa18■□□□□ 0.47
SF1-213ENST00000472725 OSGIN1Q9UJX0 560 aa18■□□□□ 0.47
SF1-213ENST00000472725 MEMO1Q9Y316 297 aa18■□□□□ 0.47
SF1-213ENST00000472725 MED12Q93074 2177 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 TMED7-TICAM2A0A0A6YYA0 188 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 TMEM229AB2RXF0 380 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 EBAG9O00559 213 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 CCL21O00585 134 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 FRS3O43559 492 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 EFNA2O43921 213 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 SERPINA1P01009 418 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 PNMTP11086 282 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 TCN1P20061 433 aaPredicted RBP17.99■□□□□ 0.47
SF1-213ENST00000472725 KCNC4Q03721 635 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 ACSF3Q4G176 576 aaPredicted RBP17.99■□□□□ 0.47
SF1-213ENST00000472725 MTX3Q5HYI7 312 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 C1QL3Q5VWW1 255 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 NSUN5P2Q63ZY6 315 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 B3GNT6Q6ZMB0 384 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 LACC1Q8IV20 430 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 CADM2Q8N3J6 435 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 OR6T1Q8NGN1 323 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 ADGRG7Q96K78 797 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 DMRTA2Q96SC8 542 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 MCHR1Q99705 422 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 TIGARQ9NQ88 270 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 SELENONQ9NZV5 590 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 ACTR3BQ9P1U1 418 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 SH3GLB1Q9Y371 365 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 TMED7Q9Y3B3 224 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 ARHGAP21Q5T5U3 1957 aa17.99■□□□□ 0.47
SF1-213ENST00000472725 M0R3H8 397 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 ZNHIT1O43257 154 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 DNAJC8O75937 253 aaPredicted RBP17.98■□□□□ 0.47
SF1-213ENST00000472725 NCK1P16333 377 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 CXCR1P25024 350 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 CLDN20P56880 219 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 SRYQ05066 204 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 TRIM25Q14258 630 aaKnown RBP17.98■□□□□ 0.47
SF1-213ENST00000472725 C5orf46Q6UWT4 87 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 CARM1Q86X55 608 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 FAM156AQ8NDB6 213 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 GEMIN6Q8WXD5 167 aaKnown RBP17.98■□□□□ 0.47
SF1-213ENST00000472725 SMPDL3BQ92485 455 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 C3orf49Q96BT1 292 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 DDIT4LQ96D03 193 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 SLC47A1Q96FL8 570 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 TPD52L3Q96J77 140 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 NSMCE2Q96MF7 247 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 THTPAQ9BU02 230 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 MMADHCQ9H3L0 296 aaPredicted RBP17.98■□□□□ 0.47
SF1-213ENST00000472725 ALKBH4Q9NXW9 302 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 PACSIN3Q9UKS6 424 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 HDGFL3Q9Y3E1 203 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 ZNF175Q9Y473 711 aa17.98■□□□□ 0.47
SF1-213ENST00000472725 ARPC2O15144 300 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 LRRTM2O43300 516 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 SEC14L5O43304 696 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 STAMBPO95630 424 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 ZNF682O95780 498 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 IL11P20809 199 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 HTR2AP28223 471 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 SLC7A1P30825 629 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 TIMP3P35625 211 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 SUCLG1P53597 346 aaKnown RBP17.97■□□□□ 0.47
SF1-213ENST00000472725 CLDN15P56746 228 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 OR1Q1Q15612 314 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 CTU2Q2VPK5 515 aaKnown RBP17.97■□□□□ 0.47
SF1-213ENST00000472725 TMEM176BQ3YBM2 270 aaPredicted RBP17.97■□□□□ 0.47
SF1-213ENST00000472725 IFI44LQ53G44 452 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 SYT14P1Q58G82 188 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 RTL6Q6ICC9 239 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 ATG4DQ86TL0 474 aaPredicted RBP17.97■□□□□ 0.47
SF1-213ENST00000472725 UBQLNLQ8IYU4 475 aa17.97■□□□□ 0.47
SF1-213ENST00000472725 OR2V1Q8NHB1 315 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms