RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 A0A1W2PP18 115 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 MSTNO14793 375 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 TROVE2P10155 538 aaKnown RBP eCLIP13.48□□□□□ -0.25
CALD1-215ENST00000472096 IL7RP16871 459 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 RYKP34925 604 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 CPOXP36551 454 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 KIR2DL3P43628 341 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 GUCY1A3Q02108 690 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 MERTKQ12866 999 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 GNA13Q14344 377 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 TMEM176BQ3YBM2 270 aaPredicted RBP13.48□□□□□ -0.25
CALD1-215ENST00000472096 CGB2Q6NT52 195 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 ZNF836Q6ZNA1 936 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 PLEKHM3Q6ZWE6 761 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 BTLAQ7Z6A9 289 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 KIF18BQ86Y91 864 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 ZZZ3Q8IYH5 903 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 ATP6V1C2Q8NEY4 427 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 ZNF563Q8TA94 476 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 OSTF1Q92882 214 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 CPNE4Q96A23 557 aaPredicted RBP13.48□□□□□ -0.25
CALD1-215ENST00000472096 A4GALTQ9NPC4 353 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 CRIM1Q9NZV1 1036 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 GMEB1Q9Y692 573 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 LRBAP50851 2863 aa13.48□□□□□ -0.25
CALD1-215ENST00000472096 A0A1W2PNR3 127 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 TMEM247A6NEH6 219 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 A6NJY4 79 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 A8MXE2 369 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 AP3D1O14617 1153 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 SS18L1O75177 396 aaPredicted RBP13.47□□□□□ -0.25
CALD1-215ENST00000472096 SMNDC1O75940 238 aaKnown RBP eCLIP13.47□□□□□ -0.25
CALD1-215ENST00000472096 PPIBP23284 216 aaKnown RBP13.47□□□□□ -0.25
CALD1-215ENST00000472096 SLC7A1P30825 629 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 CARD18P57730 90 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 KRTAP10-9P60411 292 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 LIN52Q52LA3 116 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 METTL21CQ5VZV1 264 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 FAM214BQ7L5A3 538 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 GRINAQ7Z429 371 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 VRK2Q86Y07 508 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 C10orf111Q8N326 155 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 OR52P1PQ8NH57 321 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 RNF128Q8TEB7 428 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 SLC25A43Q8WUT9 341 aaPredicted RBP13.47□□□□□ -0.25
CALD1-215ENST00000472096 MAL2Q969L2 176 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 GMPPAQ96IJ6 420 aaPredicted RBP13.47□□□□□ -0.25
CALD1-215ENST00000472096 CCDC106Q9BWC9 280 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 OPN3Q9H1Y3 402 aaPredicted RBP13.47□□□□□ -0.25
CALD1-215ENST00000472096 IKZF5Q9H5V7 419 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 CCDC134Q9H6E4 229 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 LEF1Q9UJU2 399 aaPredicted RBP13.47□□□□□ -0.25
CALD1-215ENST00000472096 CLEC4AQ9UMR7 237 aa13.47□□□□□ -0.25
CALD1-215ENST00000472096 ZNF443Q9Y2A4 671 aaPredicted RBP13.47□□□□□ -0.25
CALD1-215ENST00000472096 ANKRD17O75179 2603 aaKnown RBP13.46□□□□□ -0.25
CALD1-215ENST00000472096 A0A0G2JPF8 293 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 CDHR4A6H8M9 788 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 HNRNPCL2B2RXH8 293 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 HNRNPCL3B7ZW38 293 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 FAAHO00519 579 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 HNRNPCL1O60812 293 aaKnown RBP13.46□□□□□ -0.25
CALD1-215ENST00000472096 PLGP00747 810 aaPredicted RBP13.46□□□□□ -0.25
CALD1-215ENST00000472096 CGAP01215 116 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 THBS1P07996 1170 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 VIMP08670 466 aaKnown RBP13.46□□□□□ -0.25
CALD1-215ENST00000472096 HNRNPCL4P0DMR1 293 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 ARAFP10398 606 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 CD8BP10966 210 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 EPS8Q12929 822 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 SYT14P1Q58G82 188 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 GCNT6Q5T4J0 391 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 RNF220Q5VTB9 566 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 PRAMEF8Q5VWM4 474 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 PRAMEF7Q5VXH5 474 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 DLEU7Q6UYE1 221 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 DHDDSQ86SQ9 333 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 OR6K3Q8NGY3 331 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 BBS10Q8TAM1 723 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 FAM222BQ8WU58 562 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 ROBO4Q8WZ75 1007 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 CPPED1Q9BRF8 314 aaPredicted RBP13.46□□□□□ -0.25
CALD1-215ENST00000472096 BCL2L10Q9HD36 194 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 TIGARQ9NQ88 270 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 CTPS2Q9NRF8 586 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 GLRX2Q9NS18 164 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.46□□□□□ -0.25
CALD1-215ENST00000472096 PROCRQ9UNN8 238 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 CORO2BQ9UQ03 480 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 EMC9Q9Y3B6 208 aa13.46□□□□□ -0.25
CALD1-215ENST00000472096 CSMD2Q7Z408 3487 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 PDZD2O15018 2839 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 TUBAL3A6NHL2 446 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 ANGPT2O15123 496 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 ATP8B1O43520 1251 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 AGTR1P30556 359 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 APOBEC1P41238 236 aaKnown RBP13.45□□□□□ -0.26
CALD1-215ENST00000472096 IDH2P48735 452 aaKnown RBP13.45□□□□□ -0.26
CALD1-215ENST00000472096 ARFIP2P53365 341 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 CTBP2P56545 445 aa13.45□□□□□ -0.26
CALD1-215ENST00000472096 LARS2Q15031 903 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms