RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 MKXQ8IYA7 352 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZNF687Q8N1G0 1237 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ALG8Q9BVK2 526 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 BARX1Q9HBU1 254 aaPredicted RBP12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NFS1Q9Y697 457 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 B4DXG7 233 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FAM163BP0C2L3 166 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ARSBP15848 533 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 EFNA3P52797 238 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 APOOQ9BUR5 198 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZNF436Q9C0F3 470 aaPredicted RBP12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TWSG1Q9GZX9 223 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 GNG12Q9UBI6 72 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SIT1Q9Y3P8 196 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MTCL1Q9Y4B5 1905 aaKnown RBP12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FREM3P0C091 2139 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NCOR1O75376 2440 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SCAMP2O15127 329 aaKnown RBP12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SLC22A5O76082 557 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NFYBP25208 207 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CNR2P34972 360 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ACTBP60709 375 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ACTG1P63261 375 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR8J1Q8NGP2 316 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TLCD1Q96CP7 247 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CACNG6Q9BXT2 260 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 VRTNQ9H8Y1 702 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PHLPP1O60346 1717 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 LOC102725191A0A1B0GVB3 256 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RNASET2O00584 256 aaKnown RBP12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR7C1O76099 320 aaPredicted RBP12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NPY1RP25929 384 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HLA-DMAP28067 261 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PRSS3P35030 304 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TGM4P49221 684 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 BRICD5Q6PL45 260 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TMEM184AQ6ZMB5 413 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OVCH1Q7RTY7 1134 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PNPLA1Q8N8W4 532 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FKBP10Q96AY3 582 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 APIPQ96GX9 242 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PRAMEF26H0Y7S4 382 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 GOSR1O95249 250 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HTR5AP47898 357 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SPOCK1Q08629 439 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR4D1Q15615 310 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FAM69AQ5T7M9 428 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PIP5KL1Q5T9C9 394 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MFSD6LQ8IWD5 586 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SOBPA7XYQ1 873 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 K7EQM0 130 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TPOP07202 933 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FUT1P19526 365 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PPP5CP53041 499 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 EDDM3AQ14507 147 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RBMXL1Q96E39 390 aaKnown RBP12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 DUSP23Q9BVJ7 150 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 Q9Y3F1 56 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TSPAN11A1L157 253 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HTRA2O43464 458 aaPredicted RBP12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 DRD2P14416 443 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SLC35F2Q8IXU6 374 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 LCORQ96JN0 433 aaPredicted RBP12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 H7BYZ3 331 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HLA-DOBP13765 273 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SHEQ5VZ18 495 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZFAND4Q86XD8 727 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CHTF18Q8WVB6 975 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SGK3Q96BR1 496 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 C1QTNF6Q9BXI9 259 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 KIAA1456Q9P272 454 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RALGAPA1Q6GYQ0 2036 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TRAV27A0A087WT01 109 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SUSD5O60279 629 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NPPAP01160 153 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 EDN1P05305 212 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CRABP1P29762 137 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CSNK1EP49674 416 aaKnown RBP12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MGAT3Q09327 533 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FAM57BQ71RH2 274 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 C11orf42Q8N5U0 333 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ISOC1Q96CN7 298 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CCDC32Q9BV29 185 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ULBP2Q9BZM5 246 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PAQR5Q9NXK6 330 aaPredicted RBP12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 BOKQ9UMX3 212 aaPredicted RBP12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 A0A1W2PQL4 384 aaPredicted RBP12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FADS1O60427 444 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RPL23AP62750 156 aaKnown RBP12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CYP1B1Q16678 543 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 C14orf28Q4W4Y0 310 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NAA40Q86UY6 237 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PDZD9Q8IXQ8 264 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR52R1Q8NGF1 315 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SLC39A7Q92504 469 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FAXDC2Q96IV6 333 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 DMAC2Q9NW81 257 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZNF736B4DX44 427 aaPredicted RBP12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CXCR4P61073 352 aa12.43□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HOXA4Q00056 320 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms