RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ST3GAL3Q11203 375 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 RAB40BQ12829 278 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 IL24Q13007 206 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 ASAH1Q13510 395 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 MXD4Q14582 209 aaPredicted RBP3.11□□□□□ -1.91
PRPF3-204ENST00000470824 PDK3Q15120 406 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 TGIF1Q15583 401 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 SLC5A12Q1EHB4 618 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 Q1RN00 199 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 QRICH1Q2TAL8 776 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 GLYR1Q49A26 553 aaPredicted RBP3.11□□□□□ -1.91
PRPF3-204ENST00000470824 CEP55Q53EZ4 464 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 TCTEX1D4Q5JR98 221 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 C10orf120Q5SQS8 335 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 SLC22A10Q63ZE4 541 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 PMF1Q6P1K2 205 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 KCNIP4Q6PIL6 250 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 SYT10Q6XYQ8 523 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 MYPOPQ86VE0 399 aaPredicted RBP3.11□□□□□ -1.91
PRPF3-204ENST00000470824 MARCH9Q86YJ5 346 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 LINC01561Q8N1V8 128 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 CADM2Q8N3J6 435 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 ZCCHC7Q8N3Z6 543 aaKnown RBP3.11□□□□□ -1.91
PRPF3-204ENST00000470824 RHOXF1Q8NHV9 184 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 TGM7Q96PF1 710 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 RANBP9Q96S59 729 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 TUBGCP2Q9BSJ2 902 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 TSSK1BQ9BXA7 367 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 NXF5Q9H1B4 397 aaKnown RBP3.11□□□□□ -1.91
PRPF3-204ENST00000470824 LRRC40Q9H9A6 602 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 COX16Q9P0S2 106 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 WRAP73Q9P2S5 460 aaPredicted RBP3.11□□□□□ -1.91
PRPF3-204ENST00000470824 LCMT1Q9UIC8 334 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 ZNF221Q9UK13 617 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 SLCO1B1Q9Y6L6 691 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 WNK3Q9BYP7 1800 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 PHRF1Q9P1Y6 1649 aaKnown RBP3.11□□□□□ -1.91
PRPF3-204ENST00000470824 MYOM1P52179 1685 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 THSD7AQ9UPZ6 1657 aa3.11□□□□□ -1.91
PRPF3-204ENST00000470824 TRPM3Q9HCF6 1732 aaPredicted RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 COL14A1Q05707 1796 aaKnown RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 SLIT2O94813 1529 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 NRKQ7Z2Y5 1582 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 METTL21EPA6NDL7 271 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 B4DXG7 233 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 FCN1O00602 326 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 ARPC3O15145 178 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 SNNO75324 88 aaPredicted RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 SCRG1O75711 98 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 UGT2B17O75795 530 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 CABYRO75952 493 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 CA1P00915 261 aaPredicted RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 EFNA3P52797 238 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 IRX3P78415 501 aaPredicted RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 CXCL6P80162 114 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 HMGN5P82970 282 aaKnown RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 MAP2K1Q02750 393 aaPredicted RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 RIPK1Q13546 671 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 GANABQ14697 944 aaKnown RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 EXOC3L2Q2M3D2 409 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 TIGITQ495A1 244 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 ATAD3CQ5T2N8 411 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 MARC1Q5VT66 337 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 METTL11BQ5VVY1 283 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 UFSP1Q6NVU6 142 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 MOB3BQ86TA1 216 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 SLC39A11Q8N1S5 342 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 MTURNQ8N3F0 131 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 DHRSXQ8N5I4 330 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 FOXN4Q96NZ1 517 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 CITED1Q99966 193 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 DPH7Q9BTV6 452 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 EDEM2Q9BV94 578 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 CAB39LQ9H9S4 337 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 APMAPQ9HDC9 416 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 MIEF1Q9NQG6 463 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 NANSQ9NR45 359 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 PIPOXQ9P0Z9 390 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 PCSK1NQ9UHG2 260 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 XPO7Q9UIA9 1087 aaKnown RBP3.1□□□□□ -1.91
PRPF3-204ENST00000470824 IKBKGQ9Y6K9 419 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 ALS2Q96Q42 1657 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 ANKRD30BQ9BXX2 1392 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 AKAP12Q02952 1782 aa3.1□□□□□ -1.91
PRPF3-204ENST00000470824 CHD4Q14839 1912 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 IGHV3-35A0A0C4DH35 117 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 IGHV2-70DA0A0C4DH43 119 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 PRRG1O14668 218 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 NUDT21O43809 227 aaKnown RBP3.09□□□□□ -1.91
PRPF3-204ENST00000470824 SCGNO76038 276 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 OPN1MWP04001 364 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 OPN1MW2P0DN77 364 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 OPN1MW3P0DN78 364 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 IL2RGP31785 369 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 ANP32AP39687 249 aaKnown RBP3.09□□□□□ -1.91
PRPF3-204ENST00000470824 LIM2P55344 173 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 UBE2HP62256 183 aa3.09□□□□□ -1.91
PRPF3-204ENST00000470824 NCBP1Q09161 790 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms