RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 PROK2Q9HC23 129 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 TIMMDC1Q9NPL8 285 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 SACM1LQ9NTJ5 587 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 WDR70Q9NW82 654 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 REV1Q9UBZ9 1251 aa13.77□□□□□ -0.21
COL4A5-203ENST00000470339 A0A087WZY1 265 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 CCL3P10147 92 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 PRKAR1AP10644 381 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 POU2F1P14859 743 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 MST1P26927 711 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 TACR3P29371 465 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 CD96P40200 585 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 POLR2HP52434 150 aaKnown RBP13.76□□□□□ -0.21
COL4A5-203ENST00000470339 IL1RL1Q01638 556 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 SRSF6Q13247 344 aaKnown RBP13.76□□□□□ -0.21
COL4A5-203ENST00000470339 RASSF6Q6ZTQ3 369 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 ZNF227Q86WZ6 799 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 PLCZ1Q86YW0 608 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 CLDN22Q8N7P3 220 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 WDSUB1Q8N9V3 476 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 BPIFA2Q96DR5 249 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 HRASLS5Q96KN8 279 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 PITX2Q99697 317 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 DSN1Q9H410 356 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 RIBC2Q9H4K1 309 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 MED11Q9P086 117 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 LRFN1Q9P244 771 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 NDRG4Q9ULP0 352 aaKnown RBP13.76□□□□□ -0.21
COL4A5-203ENST00000470339 HSPE1-MOB4S4R3N1 261 aa13.76□□□□□ -0.21
COL4A5-203ENST00000470339 C2orf72A6NCS6 295 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 C17orf51A8MQB3 221 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 FAM47E-STBD1D6RA91 191 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 SNPHO15079 494 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 KLK10O43240 276 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 TLX3O43711 291 aaPredicted RBP13.75□□□□□ -0.21
COL4A5-203ENST00000470339 TRIM3O75382 744 aaPredicted RBP13.75□□□□□ -0.21
COL4A5-203ENST00000470339 IFI30P13284 250 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 PRKCAP17252 672 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 SPINK2P20155 84 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 CNR1P21554 472 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 CXCR1P25024 350 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 POLR2IP36954 125 aaKnown RBP13.75□□□□□ -0.21
COL4A5-203ENST00000470339 APOBEC1P41238 236 aaKnown RBP13.75□□□□□ -0.21
COL4A5-203ENST00000470339 ZNF41P51814 821 aaPredicted RBP13.75□□□□□ -0.21
COL4A5-203ENST00000470339 CRISP1P54107 249 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 LSM11P83369 360 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL4A5-203ENST00000470339 OC90Q02509 493 aaPredicted RBP13.75□□□□□ -0.21
COL4A5-203ENST00000470339 MFAP5Q13361 173 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 TUBA3CQ13748 450 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 PDK3Q15120 406 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 TOMM34Q15785 309 aaPredicted RBP13.75□□□□□ -0.21
COL4A5-203ENST00000470339 TIGD3Q6B0B8 471 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 OR5M10Q6IEU7 315 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 TUBA3EQ6PEY2 450 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 C5orf46Q6UWT4 87 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 MDGA2Q7Z553 956 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 PSD4Q8NDX1 1056 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 SETD9Q8NE22 299 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 OR4K17Q8NGC6 315 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 ZNF524Q96C55 264 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 DTNBP1Q96EV8 351 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 FAM46AQ96IP4 442 aaKnown RBP13.75□□□□□ -0.21
COL4A5-203ENST00000470339 MRGPRX4Q96LA9 322 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 ZNF570Q96NI8 536 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 GPA33Q99795 319 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 APOL4Q9BPW4 351 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 KLHDC3Q9BQ90 382 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 MEPEQ9NQ76 525 aaPredicted RBP13.75□□□□□ -0.21
COL4A5-203ENST00000470339 OSGIN1Q9UJX0 560 aa13.75□□□□□ -0.21
COL4A5-203ENST00000470339 SPTBN2O15020 2390 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 CNTRLQ7Z7A1 2325 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 B4DXG7 233 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 BCKDKO14874 412 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 EFSO43281 561 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 CBR3O75828 277 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 NEURL1O76050 574 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 NTN1O95631 604 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 TP53P04637 393 aaPredicted RBP13.74□□□□□ -0.21
COL4A5-203ENST00000470339 GNAO1P09471 354 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 CHMP24386 653 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 FKBP2P26885 142 aaKnown RBP13.74□□□□□ -0.21
COL4A5-203ENST00000470339 ADH6P28332 368 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 EIF1P41567 113 aaKnown RBP13.74□□□□□ -0.21
COL4A5-203ENST00000470339 PLPPR5Q32ZL2 321 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 PRAMEF20Q5VT98 475 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 ZNF691Q5VV52 312 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 RPL13AP3Q6NVV1 102 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 C8orf59Q8N0T1 100 aaPredicted RBP13.74□□□□□ -0.21
COL4A5-203ENST00000470339 SLC43A2Q8N370 569 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 OR1J4Q8NGS1 313 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 PFN4Q8NHR9 129 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 STK35Q8TDR2 534 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 LIPHQ8WWY8 451 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 HAS2Q92819 552 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 OSTF1Q92882 214 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 C1GALT1C1Q96EU7 318 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 CNBD2Q96M20 576 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 MUS81Q96NY9 551 aa13.74□□□□□ -0.21
COL4A5-203ENST00000470339 MED17Q9NVC6 651 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms