RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, human

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCFC2-205	ENST00000470197	HTR4	Q13639	388 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	MICB	Q29980	383 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	EFHC1	Q5JVL4	640 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	SPANXN2	Q5MJ10	180 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	LY6G6F	Q5SQ64	297 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	WDR25	Q64LD2	544 aa	Predicted RBP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	OR4N5	Q8IXE1	308 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	LNX1	Q8TBB1	728 aa	Predicted RBP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	C10orf35	Q96D05	121 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	TIMD4	Q96H15	378 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	RPRD1A	Q96P16	312 aa	Predicted RBP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	MCRIP2	Q9BUT9	160 aa	Known RBP	4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	RAB34	Q9BZG1	259 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	SIX2	Q9NPC8	291 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	GBF1	Q92538	1859 aa		4.08	□□□□□ -1.76
GCFC2-205	ENST00000470197	GON4L	Q3T8J9	2241 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197		H3BTX0	84 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	WWP2	O00308	870 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	POLR2D	O15514	142 aa	Known RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	SLC37A4	O43826	429 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	N4BP1	O75113	896 aa	Known RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	SEC24A	O95486	1093 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	TSPAN12	O95859	305 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	SYF2	O95926	243 aa	Known RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	CSTA	P01040	98 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	CLTA	P09496	248 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	RPL35A	P18077	110 aa	Known RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	MAGEA9	P43362	315 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	P2RY1	P47900	373 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	CEBPD	P49716	269 aa	Predicted RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	RPS15	P62841	145 aa	Known RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	DNAJC3	Q13217	504 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	FHL2	Q14192	279 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	TRIP6	Q15654	476 aa	Known RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	MRPL10	Q7Z7H8	261 aa	Known RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	HPSE2	Q8WWQ2	592 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	HMCES	Q96FZ2	354 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	LPAR4	Q99677	370 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	TSPAN13	O95857	204 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	UQCRB	P14927	111 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	PSMC3	P17980	439 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	RPL4	P36578	427 aa	Known RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	NOVA1	P51513	510 aa	Known RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	MYL7	Q01449	175 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	CUL1	Q13616	776 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	TPD52L1	Q16890	204 aa	Predicted RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	ATP1A1-AS1	Q5TC04	95 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	LCN1P1	Q5VSP4	162 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	CCDC80	Q76M96	950 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	SERPINA9	Q86WD7	417 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	STXBP6	Q8NFX7	210 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	PGLYRP2	Q96PD5	576 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	TSSK1B	Q9BXA7	367 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	PLEKHA3	Q9HB20	300 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	HIF1AN	Q9NWT6	349 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	MARCH5	Q9NX47	278 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	PARP14	Q460N5	1801 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	LGI1	O95970	557 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	OTC	P00480	354 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	IGHV4-39	P01824	125 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	CD48	P09326	243 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	HOXD3	P31249	432 aa	Predicted RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	HSD17B2	P37059	387 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	ABCG1	P45844	678 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	RIG	Q13278	110 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	UBE2V2	Q15819	145 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	STK11	Q15831	433 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	CCDC6	Q16204	474 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	PPP1R3A	Q16821	1122 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	OTOGL	Q3ZCN5	2332 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	SFT2D3	Q587I9	215 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	FAM120AOS	Q5T036	256 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	FCRLA	Q7L513	359 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	NET1	Q7Z628	596 aa	Predicted RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	ISCA2	Q86U28	154 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	TRIM69	Q86WT6	500 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	CATSPERD	Q86XM0	798 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	LACC1	Q8IV20	430 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	FAM83F	Q8NEG4	500 aa	Predicted RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	OR4K14	Q8NGD5	310 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	LILRB4	Q8NHJ6	448 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	ELMO1	Q92556	727 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	ART4	Q93070	314 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	ADGRG7	Q96K78	797 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	CCT8L2	Q96SF2	557 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	TDRD1	Q9BXT4	1180 aa	Known RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	GLIPR2	Q9H4G4	154 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	NARFL	Q9H6Q4	476 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	MYO6	Q9UM54	1294 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	WDR45	Q9Y484	360 aa		4.07	□□□□□ -1.76
GCFC2-205	ENST00000470197	IGKV6-21	A0A0C4DH24	114 aa		4.06	□□□□□ -1.76
GCFC2-205	ENST00000470197	NVL	O15381	856 aa	Known RBP	4.06	□□□□□ -1.76
GCFC2-205	ENST00000470197	KIAA0513	O60268	411 aa		4.06	□□□□□ -1.76
GCFC2-205	ENST00000470197	RAMP2	O60895	175 aa		4.06	□□□□□ -1.76
GCFC2-205	ENST00000470197	POU2F1	P14859	743 aa		4.06	□□□□□ -1.76
GCFC2-205	ENST00000470197	TBXA2R	P21731	343 aa		4.06	□□□□□ -1.76
GCFC2-205	ENST00000470197	BMI1	P35226	326 aa		4.06	□□□□□ -1.76
GCFC2-205	ENST00000470197	CDH6	P55285	790 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms