RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 KLRF1Q9NZS2 232 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 NDUFA13Q9P0J0 144 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 FBXL4Q9UKA2 621 aa17.31■□□□□ 0.36
SMC4-209ENST00000468653 SMIM31A0A1B0GVY4 71 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 SH3D21A4FU49 640 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 STMND1H3BQB6 276 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 TLX2O43763 284 aaPredicted RBP17.3■□□□□ 0.36
SMC4-209ENST00000468653 HCN1O60741 890 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 HPP00738 406 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 HTR1AP08908 422 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 GP1BBP13224 206 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 BMP7P18075 431 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 TACR3P29371 465 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 NEDD8Q15843 81 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 NTRK2Q16620 822 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 SLC30A6Q6NXT4 461 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 AHSA2Q719I0 299 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 OAFQ86UD1 273 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 CACTIN-AS1Q8N1I8 211 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 OR10G3Q8NGC4 313 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 NACC2Q96BF6 587 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 SGTBQ96EQ0 304 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 RHNO1Q9BSD3 238 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 SLC19A3Q9BZV2 496 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 METTL7AQ9H8H3 244 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 IL20RAQ9UHF4 553 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 PSORS1C1Q9UIG5 152 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 YARS2Q9Y2Z4 477 aaKnown RBP17.3■□□□□ 0.36
SMC4-209ENST00000468653 C2orf72A6NCS6 295 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 RGS10O43665 173 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 PRKYO43930 277 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 CSRP1P21291 193 aaKnown RBP17.3■□□□□ 0.36
SMC4-209ENST00000468653 MST1P26927 711 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 SOX3P41225 446 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 GABREP78334 506 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 TOMM34Q15785 309 aaPredicted RBP17.3■□□□□ 0.36
SMC4-209ENST00000468653 COL28A1Q2UY09 1125 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 FOXB2Q5VYV0 432 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 FCRLBQ6BAA4 426 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 OR5M10Q6IEU7 315 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 OPN5Q6U736 354 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 MARCH9Q86YJ5 346 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 OR2T33Q8NG76 320 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 OR4Q3Q8NH05 313 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 OR51A7Q8NH64 312 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 ZNF524Q96C55 264 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 ADAM19Q9H013 955 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 CDCP1Q9H5V8 836 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 C12orf10Q9HB07 376 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 GALNT9Q9HCQ5 603 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 SIGLEC7Q9Y286 467 aa17.3■□□□□ 0.36
SMC4-209ENST00000468653 TRAV27A0A087WT01 109 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 CLCA1A8K7I4 914 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 ADAM10O14672 748 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 TP53I11O14683 189 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 ENTPD6O75354 484 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 F8A1P23610 371 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 PGGHGQ32M88 737 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 ZNF791Q3KP31 576 aaPredicted RBP17.29■□□□□ 0.36
SMC4-209ENST00000468653 SMARCD3Q6STE5 483 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 MRGPREQ86SM8 312 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 RPS19BP1Q86WX3 136 aaKnown RBP17.29■□□□□ 0.36
SMC4-209ENST00000468653 FAM26EQ8N5C1 309 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 GPR119Q8TDV5 335 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 ASB15Q8WXK1 588 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 MYDGFQ969H8 173 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 TMIGD2Q96BF3 282 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 PLEKHA8Q96JA3 519 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 COPS4Q9BT78 406 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 TMEM43Q9BTV4 400 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 SDHAF3Q9NRP4 125 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 P4HTMQ9NXG6 502 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 DNAJC27Q9NZQ0 273 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 MUC6Q6W4X9 2439 aa17.29■□□□□ 0.36
SMC4-209ENST00000468653 EXPH5Q8NEV8 1989 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 LOC101059948A0A1B0GTJ6 334 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 MASP2O00187 686 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 CDC40O60508 579 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMC4-209ENST00000468653 MRPS14O60783 128 aaKnown RBP17.28■□□□□ 0.36
SMC4-209ENST00000468653 CH25HO95992 272 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 HMGN1P05114 100 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 CXCR1P25024 350 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 SSR4P51571 173 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 QPRTQ15274 297 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 OCLNQ16625 522 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 TMEM201Q5SNT2 666 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 BICRALQ6AI39 1079 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 GPR141Q7Z602 305 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 CYP4Z2PQ8N1L4 340 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 RNF138Q8WVD3 245 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 GGHQ92820 318 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 FAM117AQ9C073 453 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 UBQLN3Q9H347 655 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 HHATLQ9HCP6 504 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 TAS2R10Q9NYW0 307 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 IGKV1D-42A0A075B6H8 117 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 HTR3EA5X5Y0 456 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 TERTO14746 1132 aaKnown RBP17.28■□□□□ 0.36
SMC4-209ENST00000468653 PTP4A3O75365 173 aa17.28■□□□□ 0.36
SMC4-209ENST00000468653 CCNA2P20248 432 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms