RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 OLIG3Q7RTU3 272 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 C16orf62Q7Z3J2 963 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 C6orf120Q7Z4R8 191 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 DTX2Q86UW9 622 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 P2RY8Q86VZ1 359 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 CLECL1Q8IZS7 167 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 RIBC1Q8N443 379 aaPredicted RBP15.25■□□□□ 0.03
TRIM56-203ENST00000467847 TCP10LQ8TDR4 215 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 TMEM234Q8WY98 164 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 SLC35G5Q96KT7 338 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 YAE1D1Q9NRH1 226 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 NPAP1Q9NZP6 1156 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 EMC3Q9P0I2 261 aa15.25■□□□□ 0.03
TRIM56-203ENST00000467847 RNF103-CHMP3A0A140T963 221 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 OR5H1A6NKK0 313 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 TLX2O43763 284 aaPredicted RBP15.24■□□□□ 0.03
TRIM56-203ENST00000467847 CD5LO43866 347 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 UGT2B17O75795 530 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 TFPIP10646 304 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 MAD2L1Q13257 205 aaPredicted RBP15.24■□□□□ 0.03
TRIM56-203ENST00000467847 ARHGAP11BQ3KRB8 267 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 SYT14P1Q58G82 188 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 AGAP6Q5VW22 663 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 OR4F3Q6IEY1 312 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 HMBOX1Q6NT76 420 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 DNM1P46Q6ZS02 220 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 TMPPEQ6ZT21 453 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 PHC2Q8IXK0 858 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 UBE2J2Q8N2K1 259 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 ZNF433Q8N7K0 673 aaPredicted RBP15.24■□□□□ 0.03
TRIM56-203ENST00000467847 SLC25A43Q8WUT9 341 aaPredicted RBP15.24■□□□□ 0.03
TRIM56-203ENST00000467847 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.24■□□□□ 0.03
TRIM56-203ENST00000467847 GRIP2Q9C0E4 1043 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 ZNF350Q9GZX5 532 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 ACER3Q9NUN7 267 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 EXD2Q9NVH0 621 aa15.24■□□□□ 0.03
TRIM56-203ENST00000467847 NOP53Q9NZM5 478 aaKnown RBP15.24■□□□□ 0.03
TRIM56-203ENST00000467847 IGKV3D-15A0A087WSY6 115 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 RAD51DO75771 328 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 PGM3O95394 542 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 IFNA2P01563 188 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 IGHV3-9P01782 118 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 PTNP21246 168 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 CASP9P55211 416 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 CLDN8P56748 225 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 EMX2Q04743 252 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 NRF1Q16656 503 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 FBXW9Q5XUX1 488 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 ABLIM2Q6H8Q1 611 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 MTDHQ86UE4 582 aaKnown RBP15.23■□□□□ 0.03
TRIM56-203ENST00000467847 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
TRIM56-203ENST00000467847 OR4A15Q8NGL6 344 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 APH1AQ96BI3 265 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 ZHX1-C8orf76Q96EF9 292 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 RADILQ96JH8 1075 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 OR51I1Q9H343 314 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 PCDHGB4Q9UN71 923 aa15.23■□□□□ 0.03
TRIM56-203ENST00000467847 NOSIPQ9Y314 301 aaKnown RBP15.23■□□□□ 0.03
TRIM56-203ENST00000467847 SPIN1Q9Y657 262 aaPredicted RBP15.23■□□□□ 0.03
TRIM56-203ENST00000467847 CCT8L1PA6NM43 557 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 RNASET2O00584 256 aaKnown RBP15.22■□□□□ 0.03
TRIM56-203ENST00000467847 SSX4O60224 188 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 KIAA0513O60268 411 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 APOBEC1P41238 236 aaKnown RBP15.22■□□□□ 0.03
TRIM56-203ENST00000467847 IFFO1Q0D2I5 559 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 PDK3Q15120 406 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 MAPK14Q16539 360 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 ATAD3BQ5T9A4 648 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 PODNL1Q6PEZ8 512 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 TMEM108Q6UXF1 575 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 OR52N5Q8NH56 324 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 ZNF563Q8TA94 476 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 TMEM158Q8WZ71 300 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 RHNO1Q9BSD3 238 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 ASIC5Q9NY37 505 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 CHRNA9Q9UGM1 479 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 LGALS13Q9UHV8 139 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 POU2F3Q9UKI9 436 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 B3GALT5Q9Y2C3 310 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 SLC35A3Q9Y2D2 325 aa15.22■□□□□ 0.03
TRIM56-203ENST00000467847 HEATR1Q9H583 2144 aaKnown RBP15.22■□□□□ 0.03
TRIM56-203ENST00000467847 CUBNO60494 3623 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 GOLGA8QA0A0J9YX86 632 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 CIB4A0PJX0 185 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 GOLGA8OA6NCC3 632 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 GOLGA8NF8WBI6 632 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 ANKRD28O15084 1053 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 AGR2O95994 175 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 BPGMP07738 259 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 NUDT17P0C025 328 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 OR12D1P0DN82 309 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 RYKP34925 604 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 PGM1P36871 562 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 ZNF83P51522 516 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 NUDT6P53370 316 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 CHRNEQ04844 493 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 TYW3Q6IPR3 259 aaKnown RBP15.21■□□□□ 0.03
TRIM56-203ENST00000467847 SLC22A25Q6T423 547 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 KLHL17Q6TDP4 642 aa15.21■□□□□ 0.03
TRIM56-203ENST00000467847 HIPK1Q86Z02 1210 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms