RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SELENONQ9NZV5 590 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 MED11Q9P086 117 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 TNFRSF10DQ9UBN6 386 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 RPS6KB2Q9UBS0 482 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 TESQ9UGI8 421 aaKnown RBP15.79■□□□□ 0.12
CPSF4-209ENST00000465132 ICAM5Q9UMF0 924 aa15.79■□□□□ 0.12
CPSF4-209ENST00000465132 C2orf72A6NCS6 295 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 LRRC3CA6NJW4 275 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 NPIPA2E9PIF3 369 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 NPIPA3F8WFD2 350 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 AP3D1O14617 1153 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 ARPC2O15144 300 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 FMO6PO60774 539 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 LGI1O95970 557 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 SERPINA1P01009 418 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 HPNP05981 417 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 FESP07332 822 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 ZNF17P17021 662 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 ADH6P28332 368 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 MAP2K6P52564 334 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 GXYLT1Q4G148 440 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 OR5M10Q6IEU7 315 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 AAGABQ6PD74 315 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 CBLL1Q75N03 491 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 ASRGL1Q7L266 308 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 TMEM251Q8N6I4 163 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 GEMIN6Q8WXD5 167 aaKnown RBP15.78■□□□□ 0.12
CPSF4-209ENST00000465132 TAMM41Q96BW9 452 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 TPD52L3Q96J77 140 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 ZNF559Q9BR84 538 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 UGT2B28Q9BY64 529 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 UBQLN3Q9H347 655 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 EXO5Q9H790 373 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 SERINC1Q9NRX5 453 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 PNPLA3Q9NST1 481 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 TAS2R10Q9NYW0 307 aa15.78■□□□□ 0.12
CPSF4-209ENST00000465132 SPIN1Q9Y657 262 aaPredicted RBP15.78■□□□□ 0.12
CPSF4-209ENST00000465132 C7orf72A4D263 438 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 OR14I1A6ND48 311 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 SUSD5O60279 629 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 PDE5AO76074 875 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 OPN1SWP03999 348 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 ITGA2P17301 1181 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 HK1P19367 917 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 DMTNQ08495 405 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 FLOT2Q14254 428 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 IFI44LQ53G44 452 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 LCN8Q6JVE9 175 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 PGM2L1Q6PCE3 622 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 CYP4Z1Q86W10 505 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 SMYD1Q8NB12 490 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 FAM156AQ8NDB6 213 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 OR5M9Q8NGP3 310 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 CNOT9Q92600 299 aaKnown RBP15.77■□□□□ 0.12
CPSF4-209ENST00000465132 CCDC124Q96CT7 223 aaKnown RBP15.77■□□□□ 0.12
CPSF4-209ENST00000465132 MRGPRX4Q96LA9 322 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 OR2B2Q9GZK3 357 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 TMEM27Q9HBJ8 222 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 KCNN3Q9UGI6 736 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 USP22Q9UPT9 525 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 SH3GLB1Q9Y371 365 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 LIPGQ9Y5X9 500 aa15.77■□□□□ 0.12
CPSF4-209ENST00000465132 AQP12BA6NM10 295 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 GJE1A6NN92 205 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 BCKDKO14874 412 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 GCM2O75603 506 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-209ENST00000465132 ACTL6AO96019 429 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 IGHG3P01860 377 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 IFNW1P05000 195 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 HOXD4P09016 255 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-209ENST00000465132 UMPSP11172 480 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 NCK1P16333 377 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 CD247P20963 164 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 ACVR2AP27037 513 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 MAGEA5P43359 124 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 EPS8Q12929 822 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 SF3B4Q15427 424 aaKnown RBP eCLIP15.76■□□□□ 0.115e-10■■□□□ 12.5
CPSF4-209ENST00000465132 DUSP7Q16829 419 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 WBP2NLQ6ICG8 309 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 ENPP6Q6UWR7 440 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 AQP12AQ8IXF9 295 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 CLIP4Q8N3C7 705 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 GPR119Q8TDV5 335 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 PCDHAC1Q9H158 963 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 RLIMQ9NVW2 624 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 PACSIN3Q9UKS6 424 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 MED13LQ71F56 2210 aa15.76■□□□□ 0.11
CPSF4-209ENST00000465132 HCFC1P51610 2035 aa15.75■□□□□ 0.11
CPSF4-209ENST00000465132 TRGV5A0A0B4J1U4 118 aa15.75■□□□□ 0.11
CPSF4-209ENST00000465132 CENPVL1A0A0U1RR11 272 aa15.75■□□□□ 0.11
CPSF4-209ENST00000465132 A0A1B0GVC2 190 aa15.75■□□□□ 0.11
CPSF4-209ENST00000465132 CHMP24386 653 aa15.75■□□□□ 0.11
CPSF4-209ENST00000465132 ELK4P28324 431 aa15.75■□□□□ 0.11
CPSF4-209ENST00000465132 RYKP34925 604 aa15.75■□□□□ 0.11
CPSF4-209ENST00000465132 APOBEC1P41238 236 aaKnown RBP15.75■□□□□ 0.11
CPSF4-209ENST00000465132 SLC1A3P43003 542 aa15.75■□□□□ 0.11
CPSF4-209ENST00000465132 NRF1Q16656 503 aa15.75■□□□□ 0.11
CPSF4-209ENST00000465132 SWT1Q5T5J6 900 aaKnown RBP15.75■□□□□ 0.11
CPSF4-209ENST00000465132 ZNF585AQ6P3V2 769 aa15.75■□□□□ 0.11
CPSF4-209ENST00000465132 CBLN3Q6UW01 205 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms