RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 LILRB4Q8NHJ6 448 aa13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 CA5BP1Q8WTZ4 195 aa13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 WNT2BQ93097 391 aa13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 SLC35B4Q969S0 331 aa13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 ZNF845Q96IR2 970 aaPredicted RBP13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 ADGRG7Q96K78 797 aa13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 KLHL15Q96M94 604 aa13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 TM9SF2Q99805 663 aa13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 PINK1Q9BXM7 581 aa13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 CTPS2Q9NRF8 586 aa13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 CMTM6Q9NX76 183 aa13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 PAQR5Q9NXK6 330 aaPredicted RBP13.05□□□□□ -0.32
SQSTM1-205ENST00000464493 DOCK7Q96N67 2140 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 SLC22A20A6NK97 555 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 TNFSF11O14788 317 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 FRS3O43559 492 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 RCBTB2O95199 551 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 CLDN1O95832 211 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 TGM6O95932 706 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 PRG2P13727 222 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 SHC1P29353 583 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 HTR3AP46098 478 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 CARD18P57730 90 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 VEZF1Q14119 521 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 CDSNQ15517 529 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 GLIPR1L2Q4G1C9 344 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 FAM91A1Q658Y4 838 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 HBMQ6B0K9 141 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 C3orf33Q6P1S2 294 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 CCDC80Q76M96 950 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 P4HA3Q7Z4N8 544 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 ADGRG3Q86Y34 549 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 FITM2Q8N6M3 262 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 SMYD1Q8NB12 490 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 OR2T12Q8NG77 320 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 OR10D3Q8NH80 312 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 OR2V1Q8NHB1 315 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 OSTF1Q92882 214 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 ARL8BQ9NVJ2 186 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 TAGLN3Q9UI15 199 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 SLC13A4Q9UKG4 626 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 USP22Q9UPT9 525 aa13.04□□□□□ -0.32
SQSTM1-205ENST00000464493 MED12LQ86YW9 2145 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 FAM220BPB1ANY3 271 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 NDUFAB1O14561 156 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 CXCL13O43927 109 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 OPN1SWP03999 348 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 FKBP2P26885 142 aaKnown RBP13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 TACR3P29371 465 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 CPA2P48052 419 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 POLR2HP52434 150 aaKnown RBP13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 SLC7A2P52569 658 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 PSME3P61289 254 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 LIPEQ05469 1076 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 KRT72Q14CN4 511 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 PON3Q15166 354 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 DUSP7Q16829 419 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 WBP2NLQ6ICG8 309 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 MAMDC2Q7Z304 686 aaPredicted RBP13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 COMTD1Q86VU5 262 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 CADM2Q8N3J6 435 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 NAXEQ8NCW5 288 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 BCAS4Q8TDM0 211 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 SLC26A7Q8TE54 656 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 SLC25A43Q8WUT9 341 aaPredicted RBP13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 FIG4Q92562 907 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 ZFP3Q96NJ6 502 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 ADAM19Q9H013 955 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 TIGARQ9NQ88 270 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 KLHL28Q9NXS3 571 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 ZNF629Q9UEG4 869 aaPredicted RBP13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 CHRNA9Q9UGM1 479 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 OSGIN1Q9UJX0 560 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 ZNF175Q9Y473 711 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 SPIN1Q9Y657 262 aaPredicted RBP13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 HECTD1Q9ULT8 2610 aa13.03□□□□□ -0.32
SQSTM1-205ENST00000464493 TMED7-TICAM2A0A0A6YYA0 188 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 ELOVL7A1L3X0 281 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 NME4O00746 187 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 SYNGR4O95473 234 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 C8BP07358 591 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 TMIGD3P0DMS9 266 aaPredicted RBP13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 CCNA2P20248 432 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 CTSSP25774 331 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 HTR1EP28566 365 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 SLC7A1P30825 629 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 KCNJ5P48544 419 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 MAP2K6P52564 334 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 ZNF136P52737 540 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 HOXC5Q00444 222 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 OR2A2Q6IF42 318 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 PPP4R4Q6NUP7 873 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 LIX1LQ8IVB5 337 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 MICU2Q8IYU8 434 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 FNDC9Q8TBE3 224 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 RASSF5Q8WWW0 418 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 TAMM41Q96BW9 452 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 INTS12Q96CB8 462 aaKnown RBP13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 PRRG4Q9BZD6 226 aa13.02□□□□□ -0.33
SQSTM1-205ENST00000464493 UCK2Q9BZX2 261 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms