RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 LAP3P28838 519 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 RGRP47804 291 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 TDO2P48775 406 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 PRKXP51817 358 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 HSPA2P54652 639 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 RPS8P62241 208 aaKnown RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 GPM6BQ13491 265 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 KYAT1Q16773 422 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 EXOC3L2Q2M3D2 409 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 TRIM16LQ309B1 348 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 SLC25A52Q3SY17 297 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 C9orf129Q5T035 196 aaKnown RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 WDR74Q6RFH5 385 aaPredicted RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 RGS9BPQ6ZS82 235 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 CCDC80Q76M96 950 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 HSD17B13Q7Z5P4 300 aaPredicted RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 LCA5Q86VQ0 697 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 PRR22Q8IZ63 422 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 TMEM123Q8N131 208 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 C11orf42Q8N5U0 333 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 C14orf178Q8N769 122 aaPredicted RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 ATP6V0D2Q8N8Y2 350 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 FAM133AQ8N9E0 248 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 OR10H4Q8NGA5 316 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 OR9A1PQ8NGU1 263 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 PAQR8Q8TEZ7 354 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 PIGCQ92535 297 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 EFHD2Q96C19 240 aaPredicted RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 CYYR1Q96J86 154 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 CCT7Q99832 543 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 NMUR2Q9GZQ4 415 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 APMAPQ9HDC9 416 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 UFSP2Q9NUQ7 469 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 SMPD3Q9NY59 655 aaPredicted RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 IL36GQ9NZH8 169 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 TMEM9Q9P0T7 183 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 EXTL2Q9UBQ6 330 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 DCDC2Q9UHG0 476 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 PHF11Q9UIL8 331 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 UBQLN1Q9UMX0 589 aaKnown RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 CELA1Q9UNI1 258 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 ZNF256Q9Y2P7 627 aaPredicted RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 AK6Q9Y3D8 172 aaKnown RBP2.96□□□□□ -1.94
CLK1-208ENST00000464454 FRMPD3Q5JV73 1810 aa2.96□□□□□ -1.94
CLK1-208ENST00000464454 CROCCQ5TZA2 2017 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 IGHV1OR15-1A0A075B7D0 117 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 CLRN2A0PK11 232 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 TUBAL3A6NHL2 446 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 ZFP92A6NM28 416 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 SLITRK3O94933 977 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 ANXA13P27216 316 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 FGF9P31371 208 aaPredicted RBP2.95□□□□□ -1.94
CLK1-208ENST00000464454 DAP3P51398 398 aaKnown RBP2.95□□□□□ -1.94
CLK1-208ENST00000464454 ACTR1AP61163 376 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 NCBP1Q09161 790 aaKnown RBP2.95□□□□□ -1.94
CLK1-208ENST00000464454 CCDC173Q0VFZ6 552 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 CHIT1Q13231 466 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 PDK3Q15120 406 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 TPGS2Q68CL5 300 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 CASC1Q6TDU7 716 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 ARCQ7LC44 396 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 VSTM4Q8IW00 320 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 OR4D9Q8NGE8 314 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 MAIP1Q8WWC4 291 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 SMIM14Q96QK8 99 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 ZNF670Q9BS34 389 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 YTHDF1Q9BYJ9 559 aaKnown RBP2.95□□□□□ -1.94
CLK1-208ENST00000464454 VCX2Q9H322 139 aa2.95□□□□□ -1.94
CLK1-208ENST00000464454 PTBP2Q9UKA9 531 aaKnown RBP2.95□□□□□ -1.94
CLK1-208ENST00000464454 ZNF646O15015 1829 aaPredicted RBP2.94□□□□□ -1.94
CLK1-208ENST00000464454 CXCL13O43927 109 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 CCDC130P13994 396 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 GRIA1P42261 906 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 BTDP43251 543 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 RIPK4P57078 832 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 ZNF45Q02386 682 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 C1orf61Q13536 156 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 DPYSL2Q16555 572 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 PMF1Q6P1K2 205 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 FAM43BQ6ZT52 329 aaPredicted RBP2.94□□□□□ -1.94
CLK1-208ENST00000464454 ACOT7LQ6ZUV0 252 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 NLRP9Q7RTR0 991 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 TMEM179BQ7Z7N9 219 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 ZNF589Q86UQ0 364 aaPredicted RBP2.94□□□□□ -1.94
CLK1-208ENST00000464454 SLC35F2Q8IXU6 374 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 ZNF100Q8IYN0 542 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 CEND1Q8N111 149 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 C16orf74Q96GX8 76 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 NICN1Q9BSH3 213 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 RNF126Q9BV68 326 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 LRRN3Q9H3W5 708 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 LRRC40Q9H9A6 602 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 RAB18Q9NP72 206 aa2.94□□□□□ -1.94
CLK1-208ENST00000464454 TRAV26-1A0A087WT03 109 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 PCP4L1A6NKN8 68 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 TRDCB7Z8K6 153 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 F5H6K3 240 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 ZNF264O43296 627 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 OR10H3O60404 316 aa2.93□□□□□ -1.94
CLK1-208ENST00000464454 IGHG4P01861 327 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms