RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 GPC6Q9Y625 555 aaPredicted RBP15.32■□□□□ 0.04
VPS52-215ENST00000464425 HEATR5AQ86XA9 2040 aa15.32■□□□□ 0.04
VPS52-215ENST00000464425 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 ELOVL7A1L3X0 281 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 DVL2O14641 736 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 TNFSF11O14788 317 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 RCBTB2O95199 551 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 THBS1P07996 1170 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 COX6B1P14854 86 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 SHC1P29353 583 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 SFTPDP35247 375 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 SESN3P58005 492 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 PLAURQ03405 335 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 PON3Q15166 354 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 ZSWIM7Q19AV6 140 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 SLC25A35Q3KQZ1 300 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 INTS11Q5TA45 600 aaKnown RBP15.31■□□□□ 0.04
VPS52-215ENST00000464425 POMZP3Q6PJE2 187 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 RINLQ6ZS11 566 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 CCDC80Q76M96 950 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 VRK2Q86Y07 508 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 ARHGAP24Q8N264 748 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 RELL2Q8NC24 303 aaPredicted RBP15.31■□□□□ 0.04
VPS52-215ENST00000464425 OR52P1PQ8NH57 321 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 OR10D3Q8NH80 312 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 FNDC9Q8TBE3 224 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 WDR60Q8WVS4 1066 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 MARVELD3Q96A59 401 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 MRGPRX4Q96LA9 322 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 ZNF607Q96SK3 696 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 CDRT15Q96T59 188 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 SPATA5L1Q9BVQ7 753 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 NPDC1Q9NQX5 325 aaPredicted RBP15.31■□□□□ 0.04
VPS52-215ENST00000464425 ADA2Q9NZK5 511 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.31■□□□□ 0.04
VPS52-215ENST00000464425 ZNF629Q9UEG4 869 aaPredicted RBP15.31■□□□□ 0.04
VPS52-215ENST00000464425 ZNF232Q9UNY5 417 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 IFT52Q9Y366 437 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 DOCK7Q96N67 2140 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 PKDREJQ9NTG1 2253 aa15.31■□□□□ 0.04
VPS52-215ENST00000464425 A0A0J9YW62 118 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 HNRNPRO43390 633 aaKnown RBP15.3■□□□□ 0.04
VPS52-215ENST00000464425 SERPINB7O75635 380 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 NTN1O95631 604 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 NID1P14543 1247 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 PGCP20142 388 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 ADH6P28332 368 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 LARS2Q15031 903 aaKnown RBP15.3■□□□□ 0.04
VPS52-215ENST00000464425 CTU2Q2VPK5 515 aaKnown RBP15.3■□□□□ 0.04
VPS52-215ENST00000464425 TMEM176BQ3YBM2 270 aaPredicted RBP15.3■□□□□ 0.04
VPS52-215ENST00000464425 SAMD4BQ5PRF9 694 aaKnown RBP15.3■□□□□ 0.04
VPS52-215ENST00000464425 MRPL2Q5T653 305 aaKnown RBP15.3■□□□□ 0.04
VPS52-215ENST00000464425 CRYBG3Q68DQ2 2970 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 PATL1Q86TB9 770 aaKnown RBP15.3■□□□□ 0.04
VPS52-215ENST00000464425 MICU2Q8IYU8 434 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 ADGRG4Q8IZF6 3080 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 INTS1Q8N201 2190 aaKnown RBP15.3■□□□□ 0.04
VPS52-215ENST00000464425 OR2V1Q8NHB1 315 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 ZNF563Q8TA94 476 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 ADGRG7Q96K78 797 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 CACYBPQ9HB71 228 aaKnown RBP15.3■□□□□ 0.04
VPS52-215ENST00000464425 RLIMQ9NVW2 624 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 CD300AQ9UGN4 299 aa15.3■□□□□ 0.04
VPS52-215ENST00000464425 CENPEQ02224 2701 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 PRORSD1PA6NEY8 169 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 EBAG9O00559 213 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 AP3D1O14617 1153 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 ADAMDEC1O15204 470 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 CXCL13O43927 109 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 ADAM11O75078 769 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 GCM2O75603 506 aaPredicted RBP15.29■□□□□ 0.04
VPS52-215ENST00000464425 PABPC4LP0CB38 370 aaKnown RBP15.29■□□□□ 0.04
VPS52-215ENST00000464425 HSD17B1P14061 328 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 ELK4P28324 431 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 OPRM1P35372 400 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 SLC6A8P48029 635 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 IDH2P48735 452 aaKnown RBP15.29■□□□□ 0.04
VPS52-215ENST00000464425 GSK3BP49841 420 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 RASSF2P50749 326 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 MERTKQ12866 999 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 LIN52Q52LA3 116 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 SLC25A53Q5H9E4 307 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 RNF220Q5VTB9 566 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 HBMQ6B0K9 141 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 MEX3BQ6ZN04 569 aaKnown RBP15.29■□□□□ 0.04
VPS52-215ENST00000464425 ZNF836Q6ZNA1 936 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 ESPNLQ6ZVH7 1005 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 BHLHE22Q8NFJ8 381 aaPredicted RBP15.29■□□□□ 0.04
VPS52-215ENST00000464425 TMEM234Q8WY98 164 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 ST8SIA1Q92185 356 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 OSTF1Q92882 214 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 SLC7A6OSQ96CW6 309 aaPredicted RBP15.29■□□□□ 0.04
VPS52-215ENST00000464425 KLHL15Q96M94 604 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 KCTD14Q9BQ13 255 aaPredicted RBP15.29■□□□□ 0.04
VPS52-215ENST00000464425 PRRG4Q9BZD6 226 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 ARMC7Q9H6L4 198 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 EXOSC3Q9NQT5 275 aaKnown RBP15.29■□□□□ 0.04
VPS52-215ENST00000464425 ACER3Q9NUN7 267 aa15.29■□□□□ 0.04
VPS52-215ENST00000464425 DNAJB12Q9NXW2 375 aaKnown RBP15.29■□□□□ 0.04
VPS52-215ENST00000464425 PRDM4Q9UKN5 801 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms