RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 ZGLP1P0C6A0 271 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 POLR2CP19387 275 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-208ENST00000463007 ANXA7P20073 488 aaKnown RBP11.51□□□□□ -0.57
HDAC4-208ENST00000463007 MAT2AP31153 395 aaKnown RBP11.51□□□□□ -0.57
HDAC4-208ENST00000463007 BCL6P41182 706 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 CSNK1G2P78368 415 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 CAMK2DQ13557 499 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 CRMP1Q14194 572 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 MELKQ14680 651 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 GRAMD2AQ8IUY3 354 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 GALNT6Q8NCL4 622 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 OR4K13Q8NH42 304 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 LGALS14Q8TCE9 139 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 FGF11Q92914 225 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 YIPF5Q969M3 257 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 PEX11GQ96HA9 241 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 LINC00052Q96N35 136 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 TWSG1Q9GZX9 223 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 HEXA-AS1Q9H8Q6 139 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 GNG8Q9UK08 70 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 ADAM29Q9UKF5 820 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 MAN2B1O00754 1011 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 ARPC5O15511 151 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 CSNK2A2P19784 350 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-208ENST00000463007 GDNFP39905 211 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 PRR5P85299 388 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 PUDPQ08623 228 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 IRF4Q15306 451 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 CST6Q15828 149 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 ZNF613Q6PF04 617 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 NHLRC1Q6VVB1 395 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 ZNF782Q6ZMW2 699 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-208ENST00000463007 WDR88Q6ZMY6 472 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 CFAP77Q6ZQR2 320 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 LIX1LQ8IVB5 337 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 MEIOBQ8N635 442 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 SRFBP1Q8NEF9 429 aaKnown RBP11.51□□□□□ -0.57
HDAC4-208ENST00000463007 SDR9C7Q8NEX9 313 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 OR6K6Q8NGW6 343 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 SLC35A4Q96G79 324 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 SCMH1Q96GD3 660 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 GPR137Q96N19 417 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 CD180Q99467 661 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 ZNF649Q9BS31 505 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 PINK1Q9BXM7 581 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 SYNPO2LQ9H987 977 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 POLMQ9NP87 494 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-208ENST00000463007 DLL4Q9NR61 685 aa11.51□□□□□ -0.57
HDAC4-208ENST00000463007 ZNF346Q9UL40 294 aaKnown RBP11.51□□□□□ -0.57
HDAC4-208ENST00000463007 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.51□□□□□ -0.57
HDAC4-208ENST00000463007 DNAJB6O75190 326 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 MT-ND5P03915 603 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 TPOP07202 933 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 SOX2P48431 317 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 ZIC1Q15915 447 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 GSG1Q2KHT4 349 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 TCTE1Q5JU00 501 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 SLC44A3Q8N4M1 653 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 MOSPD2Q8NHP6 518 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 PTP4A1Q93096 173 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 CXorf58Q96LI9 332 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 SFXN2Q96NB2 322 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 GINS4Q9BRT9 223 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 PCBD2Q9H0N5 130 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 STON1Q9Y6Q2 735 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 TICRRQ7Z2Z1 1910 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 TBC1D3BA6NDS4 549 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 GMFGO60234 142 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 RLN1P04808 185 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 THBS2P35442 1172 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 RAD52P43351 418 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 NLRC3Q7RTR2 1065 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 FAM98AQ8NCA5 519 aaKnown RBP11.5□□□□□ -0.57
HDAC4-208ENST00000463007 OR2A1Q8NGT9 310 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 SCARF2Q96GP6 870 aaPredicted RBP11.5□□□□□ -0.57
HDAC4-208ENST00000463007 PTCHD1Q96NR3 888 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 TEAD3Q99594 435 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 SIDT1Q9NXL6 827 aaKnown RBP11.5□□□□□ -0.57
HDAC4-208ENST00000463007 IL20Q9NYY1 176 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 ZNF780BQ9Y6R6 833 aa11.5□□□□□ -0.57
HDAC4-208ENST00000463007 FXYD6-FXYD2A0A087WZ82 144 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 A0A0G2JPF8 293 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 HNRNPCL3B7ZW38 293 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 PLATP00750 562 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 ASGR2P07307 311 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 HNRNPCL4P0DMR1 293 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 NPR2P20594 1047 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 F8A1P23610 371 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 MPIP34949 423 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 KIR2DL1P43626 348 aaPredicted RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 ZP1P60852 638 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 NNATQ16517 81 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 MAPK14Q16539 360 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 PUS10Q3MIT2 529 aaKnown RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 DEFB134Q4QY38 66 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 PYHIN1Q6K0P9 492 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 KIAA1324Q6UXG2 1013 aaKnown RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 APOOLQ6UXV4 268 aa11.49□□□□□ -0.57
HDAC4-208ENST00000463007 MEPCEQ7L2J0 689 aaKnown RBP11.49□□□□□ -0.57
HDAC4-208ENST00000463007 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms