RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 LINC00052Q96N35 136 aa11.12□□□□□ -0.63
TNRC6A-204ENST00000462400 BBS4Q96RK4 519 aa11.12□□□□□ -0.63
TNRC6A-204ENST00000462400 ZFYVE21Q9BQ24 234 aa11.12□□□□□ -0.63
TNRC6A-204ENST00000462400 WFDC6Q9BQY6 131 aa11.12□□□□□ -0.63
TNRC6A-204ENST00000462400 ARHGAP9Q9BRR9 750 aa11.12□□□□□ -0.63
TNRC6A-204ENST00000462400 PTTG3PQ9NZH4 202 aa11.12□□□□□ -0.63
TNRC6A-204ENST00000462400 MAB21L2Q9Y586 359 aa11.12□□□□□ -0.63
TNRC6A-204ENST00000462400 FKBP7Q9Y680 259 aa11.12□□□□□ -0.63
TNRC6A-204ENST00000462400 A0A0J9YY10 115 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 SLC9B1P1A6NJY1 282 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 C5orf58C9J3I9 102 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 DVL2O14641 736 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 TNFSF14O43557 240 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 UBXN7O94888 489 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 IFNA16P05015 189 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 LIMS3P0CW19 117 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 LIMS4P0CW20 117 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 GIPRP48546 466 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 GFERP55789 205 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 SIM1P81133 766 aaPredicted RBP11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 CAMK2DQ13557 499 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 ARMC6Q6NXE6 501 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 CFAP77Q6ZQR2 320 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 BMPERQ8N8U9 685 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 SRFBP1Q8NEF9 429 aaKnown RBP11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 OR5D16Q8NGK9 328 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 OR5P2Q8WZ92 322 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 HSD17B8Q92506 261 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 MAP3K3Q99759 626 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 RSPO3Q9BXY4 272 aaPredicted RBP11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 GSX2Q9BZM3 304 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 SLC35C2Q9NQQ7 365 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 KCMF1Q9P0J7 381 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 PPIEQ9UNP9 301 aaKnown RBP11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 CFAP54Q96N23 3096 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 A0A1W2PRG6 482 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 KHNYNO15037 678 aaKnown RBP11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 HLA-DPB1P04440 258 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 ACSM4P0C7M7 580 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 UQCRC2P22695 453 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 MTNR1AP48039 350 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 LSM11P83369 360 aaKnown RBP eCLIP11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 RAB40BQ12829 278 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 BAMBIQ13145 260 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 PIN1Q13526 163 aaPredicted RBP11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 RUNX2Q13950 521 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 DSG2Q14126 1118 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 LTB4RQ15722 352 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 C6orf120Q7Z4R8 191 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 MEX3DQ86XN8 651 aaKnown RBP11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 GKN2Q86XP6 184 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 UBALD2Q8IYN6 164 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 GJD3Q8N144 294 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 ARIH2OSQ8N7S6 290 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 OR4D11Q8NGI4 311 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 GAL3ST3Q96A11 431 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 ZNF578Q96N58 590 aaPredicted RBP11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 AMDHD1Q96NU7 426 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 DPAGT1Q9H3H5 408 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 SERHL2Q9H4I8 314 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 TNFRSF10DQ9UBN6 386 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 ACAD8Q9UKU7 415 aa11.11□□□□□ -0.63
TNRC6A-204ENST00000462400 BCAT2O15382 392 aaPredicted RBP11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 NUPL2O15504 423 aaKnown RBP11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 TCRBP04435 133 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 DHPSP49366 369 aaPredicted RBP11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 SMSP52788 366 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 STK11Q15831 433 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 RNASE12Q5GAN4 147 aaKnown RBP11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 GPR135Q8IZ08 494 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 SUN3Q8TAQ9 357 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 RERGQ96A58 199 aaPredicted RBP11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 COL26A1Q96A83 441 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 TM4SF19Q96DZ7 209 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 SLC38A3Q99624 504 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 FAIM2Q9BWQ8 316 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 TWSG1Q9GZX9 223 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 SAP130Q9H0E3 1048 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 FGF20Q9NP95 211 aaPredicted RBP11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 ISYNA1Q9NPH2 558 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 M0R233 179 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 GPR171O14626 319 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 PRODHO43272 600 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 EIF4EP06730 217 aaKnown RBP11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 AHCYP23526 432 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 CFL1P23528 166 aaKnown RBP11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 MMP11P24347 488 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 PI4KAP42356 2102 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 TUSC1Q2TAM9 212 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 KANSL1Q7Z3B3 1105 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 LSRQ86X29 649 aaPredicted RBP11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 C7orf57Q8NEG2 295 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 OR9A2Q8NGT5 310 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 NT5CQ8TCD5 201 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 SLC38A5Q8WUX1 472 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 KAT2AQ92830 837 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 HGDQ93099 445 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 TGM7Q96PF1 710 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 OR2M2Q96R28 347 aa11.1□□□□□ -0.63
TNRC6A-204ENST00000462400 IER2Q9BTL4 223 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms