RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.91□□□□□ -1.14
LDB1-203ENST00000461873 STAC2Q6ZMT1 411 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 ZNF704Q6ZNC4 412 aaPredicted RBP7.91□□□□□ -1.14
LDB1-203ENST00000461873 BHLHA15Q7RTS1 189 aaPredicted RBP7.91□□□□□ -1.14
LDB1-203ENST00000461873 GRINAQ7Z429 371 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 GALNT5Q7Z7M9 940 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 BIVMQ86UB2 503 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 RNF130Q86XS8 419 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 CMIPQ8IY22 773 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 LRRC75A-AS1Q8N1F1 130 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 MIPOL1Q8TD10 442 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 WDR60Q8WVS4 1066 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 PMM1Q92871 262 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 GTPBP3Q969Y2 492 aaKnown RBP7.91□□□□□ -1.14
LDB1-203ENST00000461873 S100PBPQ96BU1 408 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 NEURL3Q96EH8 262 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 TRMT61AQ96FX7 289 aaKnown RBP7.91□□□□□ -1.14
LDB1-203ENST00000461873 ADGRG7Q96K78 797 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 C18orf12Q96KH6 178 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 ZNF350Q9GZX5 532 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 RAD21L1Q9H4I0 556 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 MTHFD2LQ9H903 347 aaPredicted RBP7.91□□□□□ -1.14
LDB1-203ENST00000461873 ACER3Q9NUN7 267 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 INTS9Q9NV88 658 aaKnown RBP7.91□□□□□ -1.14
LDB1-203ENST00000461873 FAIMQ9NVQ4 179 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 AIG1Q9NVV5 245 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 THUMPD1Q9NXG2 353 aaKnown RBP7.91□□□□□ -1.14
LDB1-203ENST00000461873 P2RX2Q9UBL9 471 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 ADAM21Q9UKJ8 722 aa7.91□□□□□ -1.14
LDB1-203ENST00000461873 NOSIPQ9Y314 301 aaKnown RBP7.91□□□□□ -1.14
LDB1-203ENST00000461873 CELSR1Q9NYQ6 3014 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 DSCAMO60469 2012 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 IGHV3-15A0A0B4J1V0 119 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 CCT8L1PA6NM43 557 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 C5orf58C9J3I9 102 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 UBDO15205 165 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 KIAA0513O60268 411 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 EIF1BO60739 113 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 SCN2BO60939 215 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 TMCC2O75069 709 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 MRPL33O75394 65 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 KRT33AO76009 404 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 H6PDO95479 791 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 DBIP07108 87 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 GUSBP08236 651 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 INHBBP09529 407 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 DHRS4L1P0CG22 281 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 NCF2P19878 526 aaPredicted RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 CXCR1P25024 350 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 GTF2E2P29084 291 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 EPHA3P29320 983 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 MDH1P40925 334 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 IDH2P48735 452 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 CLK1P49759 484 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 DIO1P49895 249 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 CRISP3P54108 245 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 OR2B6P58173 313 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 UFM1P61960 85 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 GNGT1P63211 74 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 SKP2Q13309 424 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 LARS2Q15031 903 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 GUSBP1Q15486 140 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 ZSWIM7Q19AV6 140 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 SLC25A53Q5H9E4 307 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 EXOSC6Q5RKV6 272 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 SFRP5Q5T4F7 317 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 SAXO2Q658L1 398 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 TYW3Q6IPR3 259 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 HEPHL1Q6MZM0 1159 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 OGFOD2Q6N063 350 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 TMPPEQ6ZT21 453 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 YTHDF3Q7Z739 585 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 ZNF440Q8IYI8 595 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 MIER2Q8N344 545 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 PIGXQ8TBF5 258 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 PIWIL2Q8TC59 973 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 LRRC8CQ8TDW0 803 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 NUDT8Q8WV74 236 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 ITCHQ96J02 903 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 CCDC115Q96NT0 180 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 TRNT1Q96Q11 434 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 SORT1Q99523 831 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 TAPBPLQ9BX59 468 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 SRXN1Q9BYN0 137 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 POTEKPQ9BYX7 375 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 QRSL1Q9H0R6 528 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 WDR55Q9H6Y2 383 aaPredicted RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 EXOSC3Q9NQT5 275 aaKnown RBP7.9□□□□□ -1.14
LDB1-203ENST00000461873 PARPBPQ9NWS1 579 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 UPB1Q9UBR1 384 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 CHRNA9Q9UGM1 479 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 POU2F3Q9UKI9 436 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 HDGFL3Q9Y3E1 203 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 RNF115Q9Y4L5 304 aa7.9□□□□□ -1.14
LDB1-203ENST00000461873 A0A1W2PP18 115 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 CFAP73A6NFT4 308 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 ZNF724A8MTY0 619 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 DEFB108AA8MXU0 73 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 C9JVG2 144 aa7.89□□□□□ -1.15
LDB1-203ENST00000461873 NPIPB9F8W1W9 429 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms