RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 PDGFCQ9NRA1 345 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 PLSCR4Q9NRQ2 329 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC6A13Q9NSD5 602 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACSS1Q9NUB1 689 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 RBM22Q9NW64 420 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SCN3BQ9NY72 215 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 TAS2R3Q9NYW6 316 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ADA2Q9NZK5 511 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 PDP1Q9P0J1 537 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 PIPOXQ9P0Z9 390 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 DNAJB11Q9UBS4 358 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SMPXQ9UHP9 88 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 KCND3Q9UK17 655 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPR34Q9UPC5 381 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CLCA2Q9UQC9 943 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CDYLQ9Y232 598 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 BTRCQ9Y297 605 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC35A3Q9Y2D2 325 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 MRPS17Q9Y2R5 130 aaKnown RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 LSM2Q9Y333 95 aaKnown RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 STARD10Q9Y365 291 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CMAHPQ9Y471 501 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHST2Q9Y4C5 530 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 IRAK3Q9Y616 596 aa3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 COL5A2P05997 1499 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P8-201ENST00000449709 ALPK3Q96L96 1907 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ABCA3Q99758 1704 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 TRAPPC13A5PLN9 417 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 DUXAA6NLW8 204 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 C5orf58C9J3I9 102 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ADM5C9JUS6 153 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ANHXE9PGG2 379 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPR31O00270 319 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 DFFAO00273 331 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ADAM10O14672 748 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 MEIS2O14770 477 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 BCKDKO14874 412 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PGRMC2O15173 223 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 UBDO15205 165 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ARPC5O15511 151 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 TGFB1I1O43294 461 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 HSPA12AO43301 675 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 FGF16O43320 207 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SUV39H1O43463 412 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 EDIL3O43854 480 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 DOK2O60496 412 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 TPST1O60507 370 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PRAMEF2O60811 474 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PRDM1O75626 825 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RECQL5O94762 991 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RGS11O94810 467 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 AKR7A3O95154 331 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CER1O95813 267 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC25A27O95847 323 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 IFNA6P05013 189 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 APODP05090 189 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 FHP07954 510 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SFTPBP07988 381 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 HMBSP08397 361 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PIPP12273 146 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PEPDP12955 493 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 HGFP14210 728 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ETS1P14921 441 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CPN1P15169 458 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 GABRB1P18505 474 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CXCL3P19876 107 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 HNF1AP20823 631 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 TBXA2RP21731 343 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPX3P22352 226 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 MPGP29372 298 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 HOXA13P31271 388 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 NNMTP40261 264 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CDKN2BP42772 138 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CAPZBP47756 277 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RGS4P49798 205 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 GSK3BP49841 420 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RORCP51449 518 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 IDH3GP51553 393 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PRKXP51817 358 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 DNAJB13P59910 316 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PRPS1P60891 318 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 BLOC1S1P78537 153 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 PSG6Q00889 435 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 EMX2Q04743 252 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CRYZQ08257 329 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 NPRL3Q12980 569 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SKP2Q13309 424 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CSHL1Q14406 222 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RAB35Q15286 201 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 SSX1Q16384 188 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 NKAIN1Q4KMZ8 207 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 CTXN3Q4LDR2 81 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 RFTN2Q52LD8 501 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 USP39Q53GS9 565 aaKnown RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM244Q5VVB8 128 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 LIPMQ5VYY2 423 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 METRNLQ641Q3 311 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM198Q66K66 360 aa3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF660Q6AZW8 331 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P8-201ENST00000449709 LPCAT3Q6P1A2 487 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms