RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 H1F0P07305 194 aaKnown RBP13.25□□□□□ -0.29
SHANK2-210ENST00000449116 CELA3AP09093 270 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 PNMTP11086 282 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 TCEA1P23193 301 aaKnown RBP13.25□□□□□ -0.29
SHANK2-210ENST00000449116 RRM2P31350 389 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 APOBEC1P41238 236 aaKnown RBP13.25□□□□□ -0.29
SHANK2-210ENST00000449116 SMIM11AP58511 58 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 ALDH6A1Q02252 535 aaKnown RBP13.25□□□□□ -0.29
SHANK2-210ENST00000449116 SLC10A1Q14973 349 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 TRAM2Q15035 370 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 ATP6AP1Q15904 470 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 TMEM44Q2T9K0 475 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 COLEC12Q5KU26 742 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 RNF217Q8TC41 542 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 LRTOMTQ8WZ04 291 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 SLC38A4Q969I6 547 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 MPP4Q96JB8 637 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 DHRS1Q96LJ7 313 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 NPAS1Q99742 590 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 ANKRD19PQ9H560 264 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 DNAJB9Q9UBS3 223 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 OSGIN1Q9UJX0 560 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 SLC7A7Q9UM01 511 aa13.25□□□□□ -0.29
SHANK2-210ENST00000449116 PCNX3Q9H6A9 2034 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 A0A087WUJ7 227 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 TMED7-TICAM2A0A0A6YYA0 188 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 A0A1W2PRQ8 180 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 OR2M5A3KFT3 312 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 ELOA3DA6NLF2 546 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-210ENST00000449116 GNGT2O14610 69 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 CLOCKO15516 846 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 WISP1O95388 367 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 LDLRP01130 860 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 CXCR1P25024 350 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 ELK4P28324 431 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 B3GALT5-AS1P59052 145 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 FOXK1P85037 733 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 DGCR6Q14129 220 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 GK3PQ14409 553 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 ELOA3BQ3SY89 546 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 WIPI1Q5MNZ9 446 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-210ENST00000449116 FAM180AQ6UWF9 173 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 SIAH3Q8IW03 269 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 ELOA3Q8NG57 546 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 OR5M1Q8NGP8 315 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 SFXN2Q96NB2 322 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 PRSS27Q9BQR3 290 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 DEFB127Q9H1M4 99 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 REEP1Q9H902 201 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 AGPAT4Q9NRZ5 378 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 MAN2C1Q9NTJ4 1040 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 CHRNA9Q9UGM1 479 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 TMED7Q9Y3B3 224 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 LYVE1Q9Y5Y7 322 aa13.24□□□□□ -0.29
SHANK2-210ENST00000449116 H0Y3Z8 333 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 LINC01387J3KSC0 135 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 TNFRSF11BO00300 401 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 GADD45GO95257 159 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 FUT4P22083 530 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 GCKP35557 465 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 MAP2K6P52564 334 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 GFRA1P56159 465 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 FOXD4Q12950 439 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-210ENST00000449116 SELENBP1Q13228 472 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 RCN1Q15293 331 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.23□□□□□ -0.29
SHANK2-210ENST00000449116 CMPK2Q5EBM0 449 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 FGD3Q5JSP0 725 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 POMZP3Q6PJE2 187 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 LINC00114Q6XXX2 140 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 ADGRG3Q86Y34 549 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 NKAIN4Q8IVV8 208 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 OR52J3Q8NH60 311 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 UBL7Q96S82 380 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-210ENST00000449116 EPYCQ99645 322 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 PKP2Q99959 881 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 BDH2Q9BUT1 245 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 SLC6A15Q9H2J7 730 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 SERINC1Q9NRX5 453 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 VNN3Q9NY84 501 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 SAMHD1Q9Y3Z3 626 aaKnown RBP13.23□□□□□ -0.29
SHANK2-210ENST00000449116 SPIN1Q9Y657 262 aaPredicted RBP13.23□□□□□ -0.29
SHANK2-210ENST00000449116 PIEZO2Q9H5I5 2752 aa13.23□□□□□ -0.29
SHANK2-210ENST00000449116 ATMQ13315 3056 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 NCKAP5O14513 1909 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 TRBV4-1A0A0J9YWV2 114 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 TMEM72A0PK05 275 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 NPIPA5E9PKD4 350 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 ZNF208O43345 1280 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 SUSD5O60279 629 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 MGRN1O60291 552 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 HCN1O60741 890 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 BAG2O95816 211 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 IGHG3P01860 377 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 CCNA2P20248 432 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 IL11P20809 199 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 CHMP24386 653 aa13.22□□□□□ -0.29
SHANK2-210ENST00000449116 FKBP2P26885 142 aaKnown RBP13.22□□□□□ -0.29
SHANK2-210ENST00000449116 RBM34P42696 430 aaKnown RBP13.22□□□□□ -0.29
SHANK2-210ENST00000449116 LIMS1P48059 325 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms