RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 ASB13Q8WXK3 278 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 HSD17B8Q92506 261 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 CNOT9Q92600 299 aaKnown RBP12.13□□□□□ -0.47
DDX56-206ENST00000446987 KAT2AQ92830 837 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 DDOQ99489 341 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 INPP5KQ9BT40 448 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 CACNG6Q9BXT2 260 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 OSGEPL1Q9H4B0 414 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 NIT2Q9NQR4 276 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 RLIMQ9NVW2 624 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 SLC23A2Q9UGH3 650 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 TRPS1Q9UHF7 1281 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 SPTBN2O15020 2390 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 RP1P56715 2156 aa12.13□□□□□ -0.47
DDX56-206ENST00000446987 A0A1B0GUH1 482 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 NPEPPSL1A6NEC2 478 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 PHYHO14832 338 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 PRMT3O60678 531 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 PRAMEF2O60811 474 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 DKK1O94907 266 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 EML2O95834 649 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ADAP00813 363 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 TFP02787 698 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ALDOBP05062 364 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 BCKDHAP12694 445 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 PAX6P26367 422 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ACRV1P26436 265 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ID4P47928 161 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 RGS4P49798 205 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ERVK-25P63136 954 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 TMEM115Q12893 351 aaPredicted RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 ILKQ13418 452 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 GTF2H2Q13888 395 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 EXOC3L2Q2M3D2 409 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 SLC36A2Q495M3 483 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ZNF658BQ4V348 819 aaPredicted RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 IFI44LQ53G44 452 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 LIN54Q6MZP7 749 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 GTF2H2CQ6P1K8 395 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 SUSD1Q6UWL2 747 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 SERPINA9Q86WD7 417 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 SLC35F3Q8IY50 421 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 KRTCAP2Q8N6L1 136 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 SELENOMQ8WWX9 145 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ELP4Q96EB1 424 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 SPRTNQ9H040 489 aaPredicted RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 RNF122Q9H9V4 155 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 FGF20Q9NP95 211 aaPredicted RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 SLAMF7Q9NQ25 335 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ASB6Q9NWX5 421 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 TESQ9UGI8 421 aaKnown RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 SPIN1Q9Y657 262 aaPredicted RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 SPAARA0A1B0GVQ0 90 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 OR2M5A3KFT3 312 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 A6NCN8 305 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ZNF593O00488 134 aaPredicted RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 VEGFDO43915 354 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 SUSD5O60279 629 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 LCMT2O60294 686 aaKnown RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 HLA-DPB1P04440 258 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 POU2F1P14859 743 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ELK1P19419 428 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 NPR2P20594 1047 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 PAICSP22234 425 aaKnown RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 ATP5A1P25705 553 aaKnown RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 SELENOPP49908 381 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 NOVA1P51513 510 aaKnown RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 RAB4BP61018 213 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 RPS25P62851 125 aaKnown RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 FABP5Q01469 135 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 SPIBQ01892 262 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 CACNG1Q06432 222 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ACSM1Q08AH1 577 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 SLC30A6Q6NXT4 461 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 GSG1LQ6UXU4 331 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 BAIAP2L2Q6UXY1 529 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 MILR1Q7Z6M3 343 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 LDB1Q86U70 411 aaPredicted RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 FAM26EQ8N5C1 309 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 RHBDD1Q8TEB9 315 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 EDARADDQ8WWZ3 215 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 APOLD1Q96LR9 279 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 IFT27Q9BW83 186 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 TSSK6Q9BXA6 273 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 CHST8Q9H2A9 424 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 PIGMQ9H3S5 423 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 PIPOXQ9P0Z9 390 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ZNF624Q9P2J8 865 aaPredicted RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 RPS6KB2Q9UBS0 482 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 ACSL6Q9UKU0 697 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 CLCA2Q9UQC9 943 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 MED16Q9Y2X0 877 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 CHST2Q9Y4C5 530 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 DNMT3AQ9Y6K1 912 aaPredicted RBP12.12□□□□□ -0.47
DDX56-206ENST00000446987 PTPRBP23467 1997 aa12.12□□□□□ -0.47
DDX56-206ENST00000446987 TRAPPC13A5PLN9 417 aa12.11□□□□□ -0.47
DDX56-206ENST00000446987 TMEM229AB2RXF0 380 aa12.11□□□□□ -0.47
DDX56-206ENST00000446987 GPR89AB7ZAQ6 455 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms