RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ERAL1O75616 437 aaKnown RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 SEMA4FO95754 770 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 RLN2P04090 185 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 TPOP07202 933 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 MAPK14Q16539 360 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 PAN3Q58A45 887 aaKnown RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 OR9A2Q8NGT5 310 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 CMKLR1Q99788 373 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ARHGDIGQ99819 225 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 NPIPA1Q9UND3 350 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ABCA2Q9BZC7 2435 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 C2CD3Q4AC94 2353 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 A0A1B0GVC2 190 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 A0A1W2PRU2 124 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 SOCS2O14508 198 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 NKX2-2O95096 273 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 LPLP06858 475 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 CX3CR1P49238 355 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 PFN3P60673 137 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 PMS2P3Q13401 168 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 GINS1Q14691 196 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 CCDC190Q86UF4 302 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 PAQR7Q86WK9 346 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 NAXDQ8IW45 347 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 LRRN4Q8WUT4 740 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 SORCS2Q96PQ0 1159 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 NAA11Q9BSU3 229 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 LAT2Q9GZY6 243 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 IKZF4Q9H2S9 585 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF395Q9H8N7 513 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 SEMA4GQ9NTN9 838 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 NDUFAF4Q9P032 175 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ADAMTS9Q9P2N4 1935 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 BORCS7-ASMTA0A0B4J1R7 106 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 A0A0B4J2A0 478 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 A0A1B0GX78 115 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 FUOMA2VDF0 154 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 EME2A4GXA9 379 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 FRG2CA6NGY1 282 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ISM1B1AKI9 464 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 H0YC42 278 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 OR1I1O60431 355 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 PMS2P2O95744 297 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 FSTP19883 344 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 HOXC12P31275 282 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 CA5AP35218 305 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 HMGCS1Q01581 520 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF425Q6IV72 752 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF296Q8WUU4 475 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 BPIFA2Q96DR5 249 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ARHGAP9Q9BRR9 750 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ABCG5Q9H222 651 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 GLRX2Q9NS18 164 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 B3GNT2Q9NY97 397 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 SHPKQ9UHJ6 478 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 H3BSA7 217 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 GAPDHSO14556 408 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 TSPAN4O14817 238 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 GPR39O43194 453 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 APOL3O95236 402 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 CPT2P23786 658 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 PTGER4P35408 488 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 DHPSP49366 369 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 DIO1P49895 249 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 PCBP4P57723 403 aaKnown RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 IKZF1Q13422 519 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 TMEM205Q6UW68 189 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 NDUFAF7Q7L592 441 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 SERPINA12Q8IW75 414 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 HOXB13Q92826 284 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 WBP1LQ9NX94 342 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 WNT16Q9UBV4 365 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 RARRES3Q9UL19 164 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 KDM4EB2RXH2 506 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 CTDSPLO15194 276 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 PTHP01270 115 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 IGHG1P01857 330 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 CHRM5P08912 532 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 PSMB1P20618 241 aaKnown RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 MAT2AP31153 395 aaKnown RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 ZNF84P51523 738 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 SCRN3Q0VDG4 424 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 IL18Q14116 193 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 C12orf73Q69YU5 71 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 CYB5R2Q6BCY4 276 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 TMEM81Q6P7N7 255 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 TRAT1Q6PIZ9 186 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 CSNK2A3Q8NEV1 391 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 OR10H4Q8NGA5 316 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 SPTSSAQ969W0 71 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 NXPE2Q96DL1 559 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 LRRC46Q96FV0 321 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 SH3YL1Q96HL8 342 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 INTS14Q96SY0 518 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 INSM2Q96T92 566 aaPredicted RBP3.5□□□□□ -1.85
SHPRH-205ENST00000433355 HDHD2Q9H0R4 259 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 SLC24A3Q9HC58 644 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 MED9Q9NWA0 146 aa3.5□□□□□ -1.85
SHPRH-205ENST00000433355 EGFL7Q9UHF1 273 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms