RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SURF6O75683 361 aaKnown RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 SCRG1O75711 98 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 PALMO75781 387 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 CABYRO75952 493 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 DUSP14O95147 198 aaKnown RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 GIG44P09565 113 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZNF44P15621 663 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 FASP25445 335 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 HMGCLP35914 325 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 ACVR1BP36896 505 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 DHPSP49366 369 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 CASP4P49662 377 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 DAPK1P53355 1430 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 LMO4P61968 165 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 CXCL6P80162 114 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 NUCB2P80303 420 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 ST3GAL3Q11203 375 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 MESDQ14696 234 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 GANABQ14697 944 aaKnown RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 NDUFA9Q16795 377 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 TPD52L1Q16890 204 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 CNPY1Q3B7I2 92 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 MAJINQ3KP22 176 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 TEX44Q53QW1 395 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 UTF1Q5T230 341 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 MEDAGQ5VYS4 303 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 BLOC1S2Q6QNY1 142 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 PAMR1Q6UXH9 720 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 STXBP4Q6ZWJ1 553 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 NLRP9Q7RTR0 991 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 KIAA1328Q86T90 577 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 GTSCR1Q86UQ5 136 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 SERINC5Q86VE9 423 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 GPR65Q8IYL9 337 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 CSNK1A1LQ8N752 337 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 Q8N9G6 341 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR5L2Q8NGL0 311 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 SPATA3Q8NHX4 192 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 CNIH3Q8TBE1 160 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 VN1R17PQ8TDU5 208 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 AENQ8WTP8 325 aaKnown RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 IL1F10Q8WWZ1 152 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 CTNNBL1Q8WYA6 563 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 CELF6Q96J87 481 aaKnown RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 CCT8L2Q96SF2 557 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 MCHR1Q99705 422 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZNF670Q9BS34 389 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 NIPSNAP3BQ9BS92 247 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 NSD3Q9BZ95 1437 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 VPS33BQ9H267 617 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 PNO1Q9NRX1 252 aaKnown RBP2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC2A6Q9UGQ3 507 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 PCSK1NQ9UHG2 260 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 ANGPTL2Q9UKU9 493 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 POLDIP2Q9Y2S7 368 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 OARD1Q9Y530 152 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 ATP7BP35670 1465 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 RREB1Q92766 1687 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 THSD7AQ9UPZ6 1657 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 POLR3AO14802 1390 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 USP47Q96K76 1375 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 NUP188Q5SRE5 1749 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 TNS1Q9HBL0 1735 aaKnown RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 IGHV2-70DA0A0C4DH43 119 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZNF705EA8MWA4 302 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 B4DXG7 233 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 PRKAB2O43741 272 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 MTX2O75431 263 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 NMT1P30419 496 aaKnown RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 IL2RGP31785 369 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 UGT1A5P35504 534 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 GRIA1P42261 906 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 XCR1P46094 333 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 RPL34P49207 117 aaKnown RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 EFNA3P52797 238 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 RIPK1Q13546 671 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 CRMP1Q14194 572 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 MXD4Q14582 209 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 PRR4Q16378 134 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 Q1RN00 199 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 EXOC3L2Q2M3D2 409 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 PAN3Q58A45 887 aaKnown RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 C10orf120Q5SQS8 335 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 TMEM225Q6GV28 225 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR8G2PQ6IF36 304 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 FAM199XQ6PEV8 388 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 Q6ZPB1 254 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 APTXQ7Z2E3 356 aaKnown RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 MOB3BQ86TA1 216 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 VSTM4Q8IW00 320 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 NAXDQ8IW45 347 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 EIF1ADQ8N9N8 165 aaKnown RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZNF485Q8NCK3 441 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR2T33Q8NG76 320 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 AGAP11Q8TF27 550 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 FAM222BQ8WU58 562 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 NT5C3BQ969T7 300 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 SDSLQ96GA7 329 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 NPY6RQ99463 290 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 APOL2Q9BQE5 337 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms