RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SLC35A5Q9BS91 424 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 ESRP2Q9H6T0 727 aaKnown RBP15.14■□□□□ 0.01
TRIM39-209ENST00000428728 SERINC1Q9NRX5 453 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 ACER3Q9NUN7 267 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 ZNF701Q9NV72 531 aaPredicted RBP15.14■□□□□ 0.01
TRIM39-209ENST00000428728 PRSS51A0A1B0GVH4 220 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 E9PBE3 544 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 SULT2B1O00204 365 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 ANKRD28O15084 1053 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 DNAJA2O60884 412 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 AGR2O95994 175 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 C1QCP02747 245 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 DHRS4L1P0CG22 281 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 LBPP18428 481 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 PGM1P36871 562 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 CLNS1AP54105 237 aaKnown RBP15.13■□□□□ 0.01
TRIM39-209ENST00000428728 HPCAP84074 193 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 BSPH1Q075Z2 132 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 FAM174BQ3ZCQ3 159 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 ADAM5Q6NVV9 412 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 SEZ6L2Q6UXD5 910 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 FRRS1Q6ZNA5 592 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 FAM71CQ8NEG0 241 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 VPS37AQ8NEZ2 397 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 LILRB1Q8NHL6 650 aaPredicted RBP15.13■□□□□ 0.01
TRIM39-209ENST00000428728 SLC25A43Q8WUT9 341 aaPredicted RBP15.13■□□□□ 0.01
TRIM39-209ENST00000428728 HSD17B8Q92506 261 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 PAIP2Q9BPZ3 127 aaKnown RBP15.13■□□□□ 0.01
TRIM39-209ENST00000428728 SSU72Q9NP77 194 aaKnown RBP15.13■□□□□ 0.01
TRIM39-209ENST00000428728 KCNK9Q9NPC2 374 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 CTPS2Q9NRF8 586 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 MARCOQ9UEW3 520 aaPredicted RBP15.13■□□□□ 0.01
TRIM39-209ENST00000428728 SLC35A3Q9Y2D2 325 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.13■□□□□ 0.01
TRIM39-209ENST00000428728 TLN2Q9Y4G6 2542 aa15.13■□□□□ 0.01
TRIM39-209ENST00000428728 CLDN24A6NM45 220 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 PAX1P15863 534 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 S100A3P33764 101 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 CSNK2A1P68400 391 aaPredicted RBP15.12■□□□□ 0.01
TRIM39-209ENST00000428728 STX3Q13277 289 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 CASP8Q14790 479 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 DPY19L1Q2PZI1 675 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 CEP85LQ5SZL2 805 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 ABLIM2Q6H8Q1 611 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 TMPPEQ6ZT21 453 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 ZNF100Q8IYN0 542 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 ZNF75CPQ92670 426 aaPredicted RBP15.12■□□□□ 0.01
TRIM39-209ENST00000428728 NEURL3Q96EH8 262 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 HEATR1Q9H583 2144 aaKnown RBP15.12■□□□□ 0.01
TRIM39-209ENST00000428728 POLE3Q9NRF9 147 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 PNPOQ9NVS9 261 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 CHRNA9Q9UGM1 479 aa15.12■□□□□ 0.01
TRIM39-209ENST00000428728 SPIN1Q9Y657 262 aaPredicted RBP15.12■□□□□ 0.01
TRIM39-209ENST00000428728 CHD3Q12873 2000 aaKnown RBP15.12■□□□□ 0.01
TRIM39-209ENST00000428728 A0A1W2PP18 115 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 ZNF724A8MTY0 619 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 TMCC2O75069 709 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 IGHV3-9P01782 118 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 SOD3P08294 240 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 ALDOCP09972 364 aaKnown RBP15.11■□□□□ 0.01
TRIM39-209ENST00000428728 CCNA2P20248 432 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 IGHV1-2P23083 117 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 CDKN1AP38936 164 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 PLAURQ03405 335 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 CHRNEQ04844 493 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 FAPQ12884 760 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 VEZF1Q14119 521 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 MPP2Q14168 576 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 PPA1Q15181 289 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 ZNF672Q499Z4 452 aaPredicted RBP15.11■□□□□ 0.01
TRIM39-209ENST00000428728 GALNT5Q7Z7M9 940 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 RNF130Q86XS8 419 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 ANKRD42Q8N9B4 389 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 PIWIL2Q8TC59 973 aaKnown RBP15.11■□□□□ 0.01
TRIM39-209ENST00000428728 GTPBP3Q969Y2 492 aaKnown RBP15.11■□□□□ 0.01
TRIM39-209ENST00000428728 ZG16BQ96DA0 208 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 ZHX1-C8orf76Q96EF9 292 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 ARL5BQ96KC2 179 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 TEX37Q96LM6 180 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 CCDC106Q9BWC9 280 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 PARD6BQ9BYG5 372 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 OR11A1Q9GZK7 315 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 MEAF6Q9HAF1 191 aa15.11■□□□□ 0.01
TRIM39-209ENST00000428728 MAGED1Q9Y5V3 778 aaPredicted RBP15.11■□□□□ 0.01
TRIM39-209ENST00000428728 PRAMEF27A3QJZ7 478 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 DPRXA6NFQ7 191 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 INAFM1C9JVW0 142 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 HMGN4O00479 90 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 AP3D1O14617 1153 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 SNUPNO95149 360 aaKnown RBP15.1■□□□□ 0.01
TRIM39-209ENST00000428728 COX5AP20674 150 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 APOBEC1P41238 236 aaKnown RBP15.1■□□□□ 0.01
TRIM39-209ENST00000428728 UFM1P61960 85 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 BST1Q10588 318 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 TNK1Q13470 666 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 GRINAQ7Z429 371 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 KIRREL3Q8IZU9 778 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 UBE2J2Q8N2K1 259 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 ARFGAP2Q8N6H7 521 aa15.1■□□□□ 0.01
TRIM39-209ENST00000428728 PNPT1Q8TCS8 783 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms