RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 GPR171O14626 319 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 ADAP00813 363 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 TFPIP10646 304 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 HOXB4P17483 251 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 BGNP21810 368 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 PGM1P36871 562 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 DIO1P49895 249 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 RNF144AP50876 292 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 MAP2K6P52564 334 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 RPS4XP62701 263 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 FAM174BQ3ZCQ3 159 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 SPANXN4Q5MJ08 99 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 TYW3Q6IPR3 259 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 TNFAIP8L2Q6P589 184 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 C22orf34Q6ZV56 151 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 BHLHA15Q7RTS1 189 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 ZNF100Q8IYN0 542 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 ARFGAP2Q8N6H7 521 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 GLB1L3Q8NCI6 653 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 PIGXQ8TBF5 258 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 NUDT8Q8WV74 236 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 FBXW5Q969U6 566 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 TRMT61AQ96FX7 289 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 CCDC115Q96NT0 180 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 PANX1Q96RD7 426 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 SORT1Q99523 831 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 PAIP2Q9BPZ3 127 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 ZNF701Q9NV72 531 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 CHRNA9Q9UGM1 479 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.74□□□□□ -0.217e-6■■□□□ 11.8
CTDSP1-202ENST00000428361 RAB21Q9UL25 225 aa13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 V9GYY5 206 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 RAI1Q7Z5J4 1906 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-202ENST00000428361 ABCA2Q9BZC7 2435 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 H7C1Q1 480 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 SMAD9O15198 467 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 SCN2BO60939 215 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 PMS2P2O95744 297 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 KCNJ10P78508 379 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 TAB1Q15750 504 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 TNFAIP8L3Q5GJ75 292 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 NCMAPQ5T1S8 102 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 ATG16L1Q676U5 607 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 ALKBH2Q6NS38 261 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 MTDHQ86UE4 582 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 CLEC4FQ8N1N0 589 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 RAB3IL1Q8TBN0 382 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 AKAP1Q92667 903 aaKnown RBP eCLIP13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 TRNT1Q96Q11 434 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 FAIMQ9NVQ4 179 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 THAP1Q9NVV9 213 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 HEATR5AQ86XA9 2040 aa13.73□□□□□ -0.21
CTDSP1-202ENST00000428361 NIPBLQ6KC79 2804 aaeCLIP13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 IGHV3-15A0A0B4J1V0 119 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 HDAC3O15379 428 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 CLOCKO15516 846 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 H6PDO95479 791 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 KRT75O95678 551 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 PGRP06401 933 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 ATP5J2P56134 94 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 BST1Q10588 318 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 TIMM23BQ5SRD1 257 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 ABLIM2Q6H8Q1 611 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 FRRS1Q6ZNA5 592 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 ZNF440Q8IYI8 595 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 RAB8BQ92930 207 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 GTPBP3Q969Y2 492 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 DDIT4LQ96D03 193 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 RADILQ96JH8 1075 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 CCDC106Q9BWC9 280 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 C20orf27Q9GZN8 174 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 QRSL1Q9H0R6 528 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 CACYBPQ9HB71 228 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 AIG1Q9NVV5 245 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 CALML5Q9NZT1 146 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 KCNE5Q9UJ90 142 aa13.72□□□□□ -0.21
CTDSP1-202ENST00000428361 IGKV3D-15A0A087WSY6 115 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 CCDC154A6NI56 674 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 ZNF500O60304 480 aaPredicted RBP13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 EIF1BO60739 113 aaKnown RBP13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 IL6P05231 212 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 IDO1P14902 403 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 GGT1P19440 569 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 RYKP34925 604 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 PPA1Q15181 289 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 STK11Q15831 433 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 ZSWIM7Q19AV6 140 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 C1QTNF12Q5T7M4 302 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 LRRC74BQ6ZQY2 392 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 RNF130Q86XS8 419 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 PEX5LQ8IYB4 626 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 PIWIL2Q8TC59 973 aaKnown RBP13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 IGFBPL1Q8WX77 278 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 APH1AQ96BI3 265 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 OR52E6Q96RD3 313 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 ALG2Q9H553 416 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 MTHFD2LQ9H903 347 aaPredicted RBP13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 NKIRAS1Q9NYS0 192 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 LAMP3Q9UQV4 416 aa13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 TRAPPC4Q9Y296 219 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms