RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 RTP4Q96DX8 246 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF597Q96LX8 424 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 HSD3B7Q9H2F3 369 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 HRH4Q9H3N8 390 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 DNAJC15Q9Y5T4 150 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 COL14A1Q05707 1796 aaKnown RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 AGPAT2O15120 278 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 MT-ND4LP03901 98 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 HBMQ6B0K9 141 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 RTL10Q7L3V2 364 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 PEBP4Q96S96 227 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 WASH6PQ9NQA3 447 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 FBXL4Q9UKA2 621 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 GPR52Q9Y2T5 361 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 FER1L6Q2WGJ9 1857 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 LAP3P28838 519 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 TAGLNQ01995 201 aaKnown RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 PAGE3Q5JUK9 113 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 HENMT1Q5T8I9 393 aaKnown RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 IGFN1Q86VF2 1251 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 ZFP41Q8N8Y5 198 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 DDX1Q92499 740 aaKnown RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 SLC25A21Q9BQT8 299 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 METTL9Q9H1A3 318 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 OR5H15A6NDH6 313 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 OR5H14A6NHG9 310 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 OR5H1A6NKK0 313 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 KLF8O95600 359 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 RPS26P62854 115 aaKnown RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 EGLN3Q9H6Z9 239 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 SIAEQ9HAT2 523 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 SLC6A20Q9NP91 592 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 SHROOM3Q8TF72 1996 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 ITGB2P05107 769 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 TM4SF1P30408 202 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 SNCAP37840 140 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 SHC2P98077 582 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 EEF1A2Q05639 463 aaKnown RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 GRASPQ7Z6J2 395 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-203ENST00000427191 CHRNA9Q9UGM1 479 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 GJD2Q9UKL4 321 aa13.56□□□□□ -0.24
PTPN13-203ENST00000427191 F5H5K5 113 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 TNFRSF10AO00220 468 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 ICAM2P13598 275 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 DTYMKP23919 212 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 GABRR1P24046 479 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 TGM4P49221 684 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 HHEXQ03014 270 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 CEACAM7Q14002 265 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 LINC00299Q6ZSB3 139 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 CMTM2Q8TAZ6 248 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 GIMAP1Q8WWP7 306 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 NSUN5Q96P11 429 aaKnown RBP13.55□□□□□ -0.24
PTPN13-203ENST00000427191 NIPAL2Q9H841 368 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF395Q9H8N7 513 aaPredicted RBP13.55□□□□□ -0.24
PTPN13-203ENST00000427191 PHRF1Q9P1Y6 1649 aaKnown RBP13.55□□□□□ -0.24
PTPN13-203ENST00000427191 MROH6A6NGR9 719 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 IL2RGP31785 369 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 HOXA1P49639 335 aaPredicted RBP13.55□□□□□ -0.24
PTPN13-203ENST00000427191 LMAN2Q12907 356 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 KANSL1Q7Z3B3 1105 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 METTL27Q8N6F8 245 aaPredicted RBP13.55□□□□□ -0.24
PTPN13-203ENST00000427191 RBMXL3Q8N7X1 1067 aaKnown RBP13.55□□□□□ -0.24
PTPN13-203ENST00000427191 GTF2H4Q92759 462 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 B3GAT1Q9P2W7 334 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 COL1A1P02452 1464 aaPredicted RBP13.55□□□□□ -0.24
PTPN13-203ENST00000427191 KNDC1Q76NI1 1749 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 TACR3P29371 465 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 CAMK2BQ13554 666 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
PTPN13-203ENST00000427191 RHBDD3Q9Y3P4 386 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 DCDC2BA2VCK2 349 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 METTL15A6NJ78 407 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 TMEM200CA6NKL6 621 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF280AP59817 542 aaPredicted RBP13.55□□□□□ -0.24
PTPN13-203ENST00000427191 C1orf87Q8N0U7 546 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 CLDN22Q8N7P3 220 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF321PQ8N8H1 164 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 M1APQ8TC57 530 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 FUBP1Q96AE4 644 aaKnown RBP13.55□□□□□ -0.24
PTPN13-203ENST00000427191 A0A0J9YY10 115 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 HPGDSO60760 199 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 PROS1P07225 676 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 ZMAT1Q5H9K5 638 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 ZNF684Q5T5D7 378 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 TXNRD3NBQ6F5E7 133 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 MOB1BQ7L9L4 216 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 IGDCC3Q8IVU1 814 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 OR10R2Q8NGX6 335 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 NETO1Q8TDF5 533 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 PIGMQ9H3S5 423 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 KCNK12Q9HB15 430 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 SLC39A9Q9NUM3 307 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 SMLR1H3BR10 107 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 ADH4P08319 380 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 SLC2A1P11166 492 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 TBPP20226 339 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 FABP6P51161 128 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 APOOLQ6UXV4 268 aa13.55□□□□□ -0.24
PTPN13-203ENST00000427191 PDZD3Q86UT5 571 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms