RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 QRSL1Q9H0R6 528 aaKnown RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 PCDHGB7Q9Y5F8 929 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 EML6Q6ZMW3 1958 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 OR5H15A6NDH6 313 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 ATXN7O15265 892 aaPredicted RBP14.29□□□□□ -0.12
SHOX2-202ENST00000425436 WBP4O75554 376 aaKnown RBP14.29□□□□□ -0.12
SHOX2-202ENST00000425436 SFTPCP11686 197 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 DRD5P21918 477 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 FMO3P31513 532 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 TRHRP34981 398 aaPredicted RBP14.29□□□□□ -0.12
SHOX2-202ENST00000425436 PSG6Q00889 435 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 GPR68Q15743 365 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 ENTPD8Q5MY95 495 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 NPSR1Q6W5P4 371 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 COMTD1Q86VU5 262 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 OR4K5Q8NGD3 323 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 OR5M3Q8NGP4 307 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 ZFAND2BQ8WV99 257 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 TM9SF4Q92544 642 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 FCGR1BQ92637 280 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 DIO2Q92813 273 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 DOK1Q99704 481 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 MCHR1Q99705 422 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 CCDC90BQ9GZT6 254 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 RASSF1Q9NS23 344 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 CLN6Q9NWW5 311 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 LUZP4Q9P127 313 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 LRFN1Q9P244 771 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 REV1Q9UBZ9 1251 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 KALRNO60229 2985 aa14.29□□□□□ -0.12
SHOX2-202ENST00000425436 TLN1Q9Y490 2541 aaKnown RBP14.28□□□□□ -0.12
SHOX2-202ENST00000425436 ZIC2O95409 532 aaPredicted RBP14.28□□□□□ -0.12
SHOX2-202ENST00000425436 KRT20P35900 424 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 CYB561P49447 251 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 SNRPGP62308 76 aaKnown RBP14.28□□□□□ -0.12
SHOX2-202ENST00000425436 LSAMPQ13449 338 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 OR1C1Q15619 314 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 SLX4IPQ5VYV7 408 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 XAF1Q6GPH4 301 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 LYPD8Q6UX82 237 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 PLEKHM3Q6ZWE6 761 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 OLIG3Q7RTU3 272 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 ZNF227Q86WZ6 799 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 CLIP4Q8N3C7 705 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 SLC22A8Q8TCC7 542 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 ACOT11Q8WXI4 607 aaPredicted RBP14.28□□□□□ -0.12
SHOX2-202ENST00000425436 PIK3R3Q92569 461 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 RORBQ92753 470 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 MUL1Q969V5 352 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 BCL7BQ9BQE9 202 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 WFDC6Q9BQY6 131 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 Q9N2J8 555 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 MAN2C1Q9NTJ4 1040 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 NPFFR2Q9Y5X5 522 aa14.28□□□□□ -0.12
SHOX2-202ENST00000425436 PRRC2CQ9Y520 2896 aaKnown RBP14.27□□□□□ -0.12
SHOX2-202ENST00000425436 EFCAB10A6NFE3 127 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 FRG2CA6NGY1 282 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 CLCA1A8K7I4 914 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 ZNF99A8MXY4 864 aaPredicted RBP14.27□□□□□ -0.12
SHOX2-202ENST00000425436 XPNPEP2O43895 674 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 TRMUO75648 421 aaKnown RBP14.27□□□□□ -0.12
SHOX2-202ENST00000425436 NEURL1O76050 574 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 KCNK2O95069 426 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 GABRB1P18505 474 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 ABCD3P28288 659 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 CASRP41180 1078 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 TNFSF10P50591 281 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 DCAF7P61962 342 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 PLEKHN1Q494U1 663 aaPredicted RBP14.27□□□□□ -0.12
SHOX2-202ENST00000425436 GTF2IRD2BQ6EKJ0 949 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 DESI1Q6ICB0 168 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 OPN5Q6U736 354 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 CASP12Q6UXS9 341 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 ZNF730Q6ZMV8 503 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 ZNF836Q6ZNA1 936 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 PTCHD4Q6ZW05 846 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 MDGA2Q7Z553 956 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 ZER1Q7Z7L7 766 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 GTF2IRD2Q86UP8 949 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 RNF113BQ8IZP6 322 aaKnown RBP14.27□□□□□ -0.12
SHOX2-202ENST00000425436 C17orf47Q8NEP4 570 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 PIGXQ8TBF5 258 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 APH1BQ8WW43 257 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 SLC39A7Q92504 469 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 ISOC1Q96CN7 298 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 TEX12Q9BXU0 123 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 HES7Q9BYE0 225 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 PRRG3Q9BZD7 231 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 RNF32Q9H0A6 362 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.27□□□□□ -0.12
SHOX2-202ENST00000425436 HPF1Q9NWY4 346 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 CNOT2Q9NZN8 540 aaKnown RBP14.27□□□□□ -0.12
SHOX2-202ENST00000425436 PSORS1C1Q9UIG5 152 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 OR10H1Q9Y4A9 318 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 CHST2Q9Y4C5 530 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 CHD6Q8TD26 2715 aa14.27□□□□□ -0.12
SHOX2-202ENST00000425436 SMG1Q96Q15 3661 aaKnown RBP14.27□□□□□ -0.13
SHOX2-202ENST00000425436 GXYLT2A0PJZ3 443 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 CDHR4A6H8M9 788 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms