RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CLHC1Q8NHS4 586 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SFXN5Q8TD22 340 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 OIT3Q8WWZ8 545 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 OTUB1Q96FW1 271 aaPredicted RBP10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 COQ10BQ9H8M1 238 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 HDGFL3Q9Y3E1 203 aa10.82□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CHD3Q12873 2000 aaKnown RBP10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 GOLGA8QA0A0J9YX86 632 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 GOLGA8OA6NCC3 632 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 E7EQL1 145 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 GOLGA8NF8WBI6 632 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SCAMP2O15127 329 aaKnown RBP10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SMAD9O15198 467 aaKnown RBP10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PROCP04070 461 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 FGF4P08620 206 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 BCKDHAP12694 445 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 APEHP13798 732 aaKnown RBP10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 UQCRBP14927 111 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 COX5AP20674 150 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PRPS1L1P21108 318 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SOAT1P35610 550 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SESN3P58005 492 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SNRPD2P62316 118 aaKnown RBP10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 GNA13Q14344 377 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 GGTLC2Q14390 218 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 TOMM34Q15785 309 aaPredicted RBP10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CARTPTQ16568 116 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ZNF385BQ569K4 471 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SYT14P1Q58G82 188 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 UBAP2Q5T6F2 1119 aaKnown RBP10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ZNF525Q8N782 197 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C10orf105Q8TEF2 133 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 DDIT4LQ96D03 193 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 MUS81Q96NY9 551 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 OR7D2Q96RA2 312 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ZNF300Q96RE9 604 aaPredicted RBP10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SDF2Q99470 211 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 NMUR2Q9GZQ4 415 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 MANSC1Q9H8J5 431 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 MOV10Q9HCE1 1003 aaKnown RBP10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ACER3Q9NUN7 267 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SLC35A3Q9Y2D2 325 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 TRAF6Q9Y4K3 522 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CCL27Q9Y4X3 112 aa10.81□□□□□ -0.68
HLA-DQB3-203ENST00000425319 RTTNQ86VV8 2226 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 NPIPA5A0A0B4J1W7 369 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 LOC390937A0A1W2PQ73 354 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 NPIPA7E9PJI5 369 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 LSM1O15116 133 aaKnown RBP10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 KIAA0513O60268 411 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PLIN3O60664 434 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PEX11AO75192 247 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PMS2P2O95744 297 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 IGHV3-9P01782 118 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 UBTFL6P0CB48 400 aaPredicted RBP10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 NPIPA8P0DM63 369 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 EFNA1P20827 205 aaPredicted RBP10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PCMT1P22061 227 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ANXA11P50995 505 aaKnown RBP10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 MAP2K6P52564 334 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 OR2B6P58173 313 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PHC1P78364 1004 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 HPCAP84074 193 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 FAM153CQ494X1 144 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PDZK1Q5T2W1 519 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 FNDC5Q8NAU1 212 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 FCRL1Q96LA6 429 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 VRK1Q99986 396 aaPredicted RBP10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C19orf24Q9BVV8 132 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C1QTNF6Q9BXI9 259 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 BHLHE41Q9C0J9 482 aaPredicted RBP10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ANKZF1Q9H8Y5 726 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CHODLQ9H9P2 273 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 POLE3Q9NRF9 147 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CHRNA9Q9UGM1 479 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 DCTN4Q9UJW0 460 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 TRAPPC4Q9Y296 219 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SLC9A8Q9Y2E8 581 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SLC25A15Q9Y619 301 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 USF3Q68DE3 2245 aa10.8□□□□□ -0.68
HLA-DQB3-203ENST00000425319 IGKV3D-15A0A087WSY6 115 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 A0A1W2PPM1 405 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SNUPNO95149 360 aaKnown RBP10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C6orf47O95873 294 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 TGFAP01135 160 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CRYAAP02489 173 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 LAMP1P11279 417 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 GCAP28676 217 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SRP14P37108 136 aaKnown RBP10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SLC35A1P78382 337 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SCGB2A2Q13296 93 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ZNF141Q15928 474 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 GABRA6Q16445 453 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PGS1Q32NB8 556 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 FAM219BQ5XKK7 198 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 CASP12Q6UXS9 341 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SLC46A3Q7Z3Q1 461 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 GRINAQ7Z429 371 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C6orf120Q7Z4R8 191 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms