RNA–Protein interactions for RNA: ENST00000425203.1

LIMK2-205, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best)

Gene LIMK2, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-205ENST00000425203 ALDH3A1P30838 453 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 APOBEC3AP31941 199 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-205ENST00000425203 RNF144AP50876 292 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-205ENST00000425203 CSNK2A1P68400 391 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-205ENST00000425203 CBFBQ13951 182 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 SQLEQ14534 574 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 QPRTQ15274 297 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 KRT71Q3SY84 523 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 TIGD2Q4W5G0 525 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 FAM120AOSQ5T036 256 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.23□□□□□ -0.29
LIMK2-205ENST00000425203 CLEC6AQ6EIG7 209 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 OR7E24Q6IFN5 339 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 C3orf33Q6P1S2 294 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 R3HCC1LQ7Z5L2 792 aaKnown RBP13.23□□□□□ -0.29
LIMK2-205ENST00000425203 MTDHQ86UE4 582 aaKnown RBP13.23□□□□□ -0.29
LIMK2-205ENST00000425203 RFWD2Q8NHY2 731 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 TCP10LQ8TDR4 215 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 FCRL1Q96LA6 429 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 ACTRT3Q9BYD9 372 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 SERINC1Q9NRX5 453 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 SIRT3Q9NTG7 399 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-205ENST00000425203 ASB6Q9NWX5 421 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 EMC3Q9P0I2 261 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 PTGDR2Q9Y5Y4 395 aa13.23□□□□□ -0.29
LIMK2-205ENST00000425203 NUP214P35658 2090 aaPredicted RBP13.23□□□□□ -0.29
LIMK2-205ENST00000425203 IGKV3D-15A0A087WSY6 115 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 NPIPA5A0A0B4J1W7 369 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 NPIPA7E9PJI5 369 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 NPIPB9F8W1W9 429 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 M0R1B8 84 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 SULT2B1O00204 365 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 NDUFS8O00217 210 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 IGHV3-9P01782 118 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 NPIPA8P0DM63 369 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 HNF1AP20823 631 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 ASMTP46597 345 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 DIO1P49895 249 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 SRSF2Q01130 221 aaKnown RBP13.22□□□□□ -0.29
LIMK2-205ENST00000425203 SPOCK1Q08629 439 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 RFTN2Q52LD8 501 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-205ENST00000425203 DCST2Q5T1A1 773 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 CDC73Q6P1J9 531 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 B3GLCTQ6Y288 498 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 ZNF614Q8N883 585 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 CLHC1Q8NHS4 586 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 APH1AQ96BI3 265 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 FKRPQ9H9S5 495 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 TAS2R16Q9NYV7 291 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 FAF1Q9UNN5 650 aaPredicted RBP13.22□□□□□ -0.29
LIMK2-205ENST00000425203 NOSIPQ9Y314 301 aaKnown RBP13.22□□□□□ -0.29
LIMK2-205ENST00000425203 TMED5Q9Y3A6 229 aa13.22□□□□□ -0.29
LIMK2-205ENST00000425203 A0A1W2PR80 420 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 SLC35F4A4IF30 521 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 VWC2LB2RUY7 222 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 GPR171O14626 319 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 DNAJA2O60884 412 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 H6PDO95479 791 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 CHRNGP07510 517 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 KRT16P08779 473 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 EFNA1P20827 205 aaPredicted RBP13.21□□□□□ -0.29
LIMK2-205ENST00000425203 CCT3P49368 545 aaKnown RBP13.21□□□□□ -0.29
LIMK2-205ENST00000425203 PDLIM4P50479 330 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 GABRA6Q16445 453 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 NDUFAF6Q330K2 333 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 ZCCHC23Q6ZST2 131 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 TMCO5AQ8N6Q1 288 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 ST8SIA1Q92185 356 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 MSI2Q96DH6 328 aaKnown RBP13.21□□□□□ -0.29
LIMK2-205ENST00000425203 TRMOQ9BU70 441 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 THUMPD3Q9BV44 507 aaKnown RBP13.21□□□□□ -0.29
LIMK2-205ENST00000425203 C1QTNF6Q9BXI9 259 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 LAT2Q9GZY6 243 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 CHODLQ9H9P2 273 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 FIS1Q9Y3D6 152 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 ATP23Q9Y6H3 246 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 KCNE3Q9Y6H6 103 aa13.21□□□□□ -0.29
LIMK2-205ENST00000425203 ARFGEF3Q5TH69 2177 aa13.21□□□□□ -0.3
LIMK2-205ENST00000425203 TMEM233B4DJY2 109 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 AZIN1O14977 448 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 RGS16O15492 202 aaPredicted RBP13.2□□□□□ -0.3
LIMK2-205ENST00000425203 TYROBPO43914 113 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 MRPL33O75394 65 aaKnown RBP13.2□□□□□ -0.3
LIMK2-205ENST00000425203 LY6HO94772 140 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 PGRP06401 933 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 UBL4AP11441 157 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 NEFHP12036 1026 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 NR4A2P43354 598 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 CCR4P51679 360 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 SESN3P58005 492 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 GGTLC2Q14390 218 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 C1QTNF12Q5T7M4 302 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 RNF165Q6ZSG1 346 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 IL17RELQ6ZVW7 336 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 OR56A1Q8NGH5 318 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 OR2T11Q8NH01 316 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 PSMA8Q8TAA3 256 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 SLC25A43Q8WUT9 341 aaPredicted RBP13.2□□□□□ -0.3
LIMK2-205ENST00000425203 TMEM234Q8WY98 164 aa13.2□□□□□ -0.3
LIMK2-205ENST00000425203 OR5P2Q8WZ92 322 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms