RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 KLF17Q5JT82 389 aaPredicted RBP7.71□□□□□ -1.18
TRIM39-206ENST00000420746 MTERF4Q7Z6M4 381 aaKnown RBP7.71□□□□□ -1.18
TRIM39-206ENST00000420746 RETREG3Q86VR2 466 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 BCL6BQ8N143 479 aaPredicted RBP7.71□□□□□ -1.18
TRIM39-206ENST00000420746 OR2L13Q8N349 312 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 GATSQ8NAP1 163 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 SLC16A11Q8NCK7 471 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 DEFB108BQ8NET1 73 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 CEP70Q8NHQ1 597 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 PIGXQ8TBF5 258 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 HOXB13Q92826 284 aaPredicted RBP7.71□□□□□ -1.18
TRIM39-206ENST00000420746 ARL8AQ96BM9 186 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 TSPAN17Q96FV3 270 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 SH3YL1Q96HL8 342 aaPredicted RBP7.71□□□□□ -1.18
TRIM39-206ENST00000420746 UBXN10Q96LJ8 280 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 SLC30A2Q9BRI3 323 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 RHOJQ9H4E5 214 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 ZNF385DQ9H6B1 395 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 TCF7L1Q9HCS4 588 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 UBQLN4Q9NRR5 601 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 PARPBPQ9NWS1 579 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 AURKAIP1Q9NWT8 199 aaPredicted RBP7.71□□□□□ -1.18
TRIM39-206ENST00000420746 REV1Q9UBZ9 1251 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 RNF114Q9Y508 228 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 PSAT1Q9Y617 370 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 ARPC4-TTLL3A0A0A6YYG9 625 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 UPK1AO00322 258 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 DNPH1O43598 174 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 IGKV3-15P01624 115 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 CSF1P09603 554 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 NUDT7P0C024 238 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 HPGDP15428 266 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 PRKCAP17252 672 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 DIO1P49895 249 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 PROK1P58294 105 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 RELBQ01201 579 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 CD226Q15762 336 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 C9orf135Q5VTT2 229 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 FRG2Q64ET8 278 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 METTL2BQ6P1Q9 378 aaKnown RBP7.7□□□□□ -1.18
TRIM39-206ENST00000420746 TRMT10BQ6PF06 316 aaKnown RBP7.7□□□□□ -1.18
TRIM39-206ENST00000420746 CASP12Q6UXS9 341 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 TMPPEQ6ZT21 453 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 WDFY1Q8IWB7 410 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 PPIL6Q8IXY8 311 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 ATP6V1C2Q8NEY4 427 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 MAGEE2Q8TD90 523 aaPredicted RBP7.7□□□□□ -1.18
TRIM39-206ENST00000420746 EXT2Q93063 718 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 ZHX1-C8orf76Q96EF9 292 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 FRG2BQ96QU4 278 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 OR5B2Q96R09 309 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 ATOH8Q96SQ7 321 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 MS4A7Q9GZW8 240 aaPredicted RBP7.7□□□□□ -1.18
TRIM39-206ENST00000420746 PRDM13Q9H4Q3 707 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 SLC35C2Q9NQQ7 365 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 SLC7A10Q9NS82 523 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 NSMCE4AQ9NXX6 385 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 ASH2LQ9UBL3 628 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 SLC9A8Q9Y2E8 581 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 RNF11Q9Y3C5 154 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 CMAHPQ9Y471 501 aa7.7□□□□□ -1.18
TRIM39-206ENST00000420746 WNK2Q9Y3S1 2297 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 DNAH9Q9NYC9 4486 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 SRRM5B3KS81 715 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 SCDO00767 359 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 H6PDO95479 791 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 FAM157BP0CG42 384 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 GABRA3P34903 492 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 MAP3K8P41279 467 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 P2RX1P51575 399 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 ZNF117Q03924 483 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 HEPACAMQ14CZ8 416 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 KCTD19Q17RG1 926 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-206ENST00000420746 TBRG1Q3YBR2 411 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 VPS26BQ4G0F5 336 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 HIKESHIQ53FT3 197 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 OTUD3Q5T2D3 398 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-206ENST00000420746 STEAP4Q687X5 459 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 ABHD12BQ7Z5M8 362 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-206ENST00000420746 IL17RDQ8NFM7 739 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 OR6Y1Q8NGX8 325 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 SLC25A43Q8WUT9 341 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-206ENST00000420746 EXOSC8Q96B26 276 aaKnown RBP7.69□□□□□ -1.18
TRIM39-206ENST00000420746 GATA5Q9BWX5 397 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-206ENST00000420746 KCNF1Q9H3M0 494 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 IPPKQ9H8X2 491 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 DDX18Q9NVP1 670 aaKnown RBP7.69□□□□□ -1.18
TRIM39-206ENST00000420746 NFU1Q9UMS0 254 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 POLR3KQ9Y2Y1 108 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-206ENST00000420746 AUP1Q9Y679 476 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 CAPN6Q9Y6Q1 641 aa7.69□□□□□ -1.18
TRIM39-206ENST00000420746 GXYLT2A0PJZ3 443 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 CCDC189A1A4V9 331 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 OR6C65A6NJZ3 312 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 SYCE1LA8MT33 242 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 MYO1GB0I1T2 1018 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 SUPT3HB4E1H0 165 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 C3orf84H3BNL1 204 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 UBXN8O00124 270 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 SULT2B1O00204 365 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms