RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 WDR45Q9Y484 360 aa15.3■□□□□ 0.04
PTCD1-202ENST00000419981 SPIN1Q9Y657 262 aaPredicted RBP15.3■□□□□ 0.04
PTCD1-202ENST00000419981 ITM2AO43736 263 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 KIAA0513O60268 411 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 OR12D1P0DN82 309 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 UQCRC2P22695 453 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 IGHV1-2P23083 117 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 EDNRAP25101 427 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 FAPQ12884 760 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 TIMM23BQ5SRD1 257 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 ABLIM2Q6H8Q1 611 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 HEPHL1Q6MZM0 1159 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 TNFAIP8L2Q6P589 184 aaPredicted RBP15.29■□□□□ 0.04
PTCD1-202ENST00000419981 DNAJC14Q6Y2X3 702 aaPredicted RBP15.29■□□□□ 0.04
PTCD1-202ENST00000419981 SSX8Q7RTT4 187 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF781Q8N8C0 355 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF563Q8TA94 476 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 XAGE5Q8WWM1 108 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 OIT3Q8WWZ8 545 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF75CPQ92670 426 aaPredicted RBP15.29■□□□□ 0.04
PTCD1-202ENST00000419981 ALG2Q9H553 416 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 AKTIPQ9H8T0 292 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 POLE3Q9NRF9 147 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 EMC3Q9P0I2 261 aa15.29■□□□□ 0.04
PTCD1-202ENST00000419981 WDR91A4D1P6 747 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 RNF223E7ERA6 249 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 CPSF4O95639 269 aaKnown RBP15.28■□□□□ 0.04
PTCD1-202ENST00000419981 SERPINE1P05121 402 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 TFPIP10646 304 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 GGT1P19440 569 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 PGM1P36871 562 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 APOBEC1P41238 236 aaKnown RBP15.28■□□□□ 0.04
PTCD1-202ENST00000419981 ABCE1P61221 599 aaKnown RBP15.28■□□□□ 0.04
PTCD1-202ENST00000419981 KRTAP1-1Q07627 177 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 CHI3L2Q15782 390 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 MAPK14Q16539 360 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 PGGHGQ32M88 737 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 TYW3Q6IPR3 259 aaKnown RBP15.28■□□□□ 0.04
PTCD1-202ENST00000419981 EMBQ6PCB8 327 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 P2RY8Q86VZ1 359 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 ANKRD46Q86W74 232 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 MAPK1IP1LQ8NDC0 245 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 FAM71CQ8NEG0 241 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 VPS37AQ8NEZ2 397 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 AENQ8WTP8 325 aaKnown RBP15.28■□□□□ 0.04
PTCD1-202ENST00000419981 ZHX1-C8orf76Q96EF9 292 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 SLCO5A1Q9H2Y9 848 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 CTPS2Q9NRF8 586 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 FAIMQ9NVQ4 179 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 CISD1Q9NZ45 108 aaKnown RBP15.28■□□□□ 0.04
PTCD1-202ENST00000419981 CHRNA9Q9UGM1 479 aa15.28■□□□□ 0.04
PTCD1-202ENST00000419981 IGKV3D-15A0A087WSY6 115 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 PRSS51A0A1B0GVH4 220 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 ANKRD28O15084 1053 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 RAMP1O60894 148 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 SCN2BO60939 215 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 GUSBP08236 651 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 MYZAPP0CAP1 466 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 ACVR1BP36896 505 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 KHKP50053 298 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 CDH11P55287 796 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 HPCAP84074 193 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 DMTNQ08495 405 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 FUT5Q11128 374 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 PDK3Q15120 406 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 DPY19L1Q2PZI1 675 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 ANXA8L1Q5VT79 327 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 FRRS1Q6ZNA5 592 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 MTDHQ86UE4 582 aaKnown RBP15.27■□□□□ 0.04
PTCD1-202ENST00000419981 UBE2J2Q8N2K1 259 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 ZNF433Q8N7K0 673 aaPredicted RBP15.27■□□□□ 0.04
PTCD1-202ENST00000419981 RAB8BQ92930 207 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 TESCQ96BS2 214 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 ROPN1LQ96C74 230 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 HS6ST2Q96MM7 605 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 TRAF4Q9BUZ4 470 aaPredicted RBP15.27■□□□□ 0.04
PTCD1-202ENST00000419981 CCDC106Q9BWC9 280 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 REG4Q9BYZ8 158 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 SAP130Q9H0E3 1048 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 NOSIPQ9Y314 301 aaKnown RBP15.27■□□□□ 0.04
PTCD1-202ENST00000419981 RAP2CQ9Y3L5 183 aa15.27■□□□□ 0.04
PTCD1-202ENST00000419981 OR5H1A6NKK0 313 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 SHISA9B4DS77 424 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 ABCD4O14678 606 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 BCAS1O75363 584 aaPredicted RBP15.26■□□□□ 0.03
PTCD1-202ENST00000419981 RAD51DO75771 328 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 SNUPNO95149 360 aaKnown RBP15.26■□□□□ 0.03
PTCD1-202ENST00000419981 PGM3O95394 542 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 PMS2P2O95744 297 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 IGHV4-39P01824 125 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 RYKP34925 604 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 CHI3L1P36222 383 aaPredicted RBP15.26■□□□□ 0.03
PTCD1-202ENST00000419981 CLNS1AP54105 237 aaKnown RBP15.26■□□□□ 0.03
PTCD1-202ENST00000419981 PHC1P78364 1004 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 GPAT3Q53EU6 434 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 FBXW9Q5XUX1 488 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 SAXO2Q658L1 398 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 GRINAQ7Z429 371 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 ARFGAP2Q8N6H7 521 aa15.26■□□□□ 0.03
PTCD1-202ENST00000419981 PIGXQ8TBF5 258 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms