RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ACSL1P33121 698 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 NAA10P41227 235 aaPredicted RBP13.37□□□□□ -0.27
HDAC9-208ENST00000417496 PPP1CAP62136 330 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 MAB21L1Q13394 359 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 NTRK2Q16620 822 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 TMPRSS11FQ6ZWK6 438 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 IZUMO1Q8IYV9 350 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 RNF113BQ8IZP6 322 aaKnown RBP13.37□□□□□ -0.27
HDAC9-208ENST00000417496 LRRC17Q8N6Y2 441 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 SDR9C7Q8NEX9 313 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 OR52E2Q8NGJ4 325 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 GRPEL2Q8TAA5 225 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 CREB3L1Q96BA8 519 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 PILRAQ9UKJ1 303 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 SLC35A3Q9Y2D2 325 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 PSMD9O00233 223 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 PTP4A3O75365 173 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 GALP22466 123 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 EMDP50402 254 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 MRPL28Q13084 256 aaKnown RBP13.37□□□□□ -0.27
HDAC9-208ENST00000417496 PRICKLE4Q2TBC4 344 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 SLC36A2Q495M3 483 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 LYPD4Q6UWN0 246 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 PRSS45Q7RTY3 260 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 BEST4Q8NFU0 473 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 ZNRF4Q8WWF5 429 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 SCARF2Q96GP6 870 aaPredicted RBP13.37□□□□□ -0.27
HDAC9-208ENST00000417496 SFXN1Q9H9B4 322 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 BEX1Q9HBH7 125 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 NCKAP1Q9Y2A7 1128 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 CACNG2Q9Y698 323 aa13.37□□□□□ -0.27
HDAC9-208ENST00000417496 A0A1B0GWA3 101 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 CHP2O43745 196 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 SOX30O94993 753 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 TFP02787 698 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 SLC2A5P22732 501 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 MAGEB1P43366 347 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 CCR6P51684 374 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 GNG2P59768 71 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 DGCR2P98153 550 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 NNATQ16517 81 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 NDUFAF6Q330K2 333 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 LIX1LQ8IVB5 337 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 CDRT4Q8N9R6 151 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 OR7G1Q8NGA0 311 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 MS4A3Q96HJ5 214 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 MYADMQ96S97 322 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 ZNF559Q9BR84 538 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 NIPAL2Q9H841 368 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 TRPV4Q9HBA0 871 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 ACTR10Q9NZ32 417 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 ADAM18Q9Y3Q7 739 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 HRKO00198 91 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 CYR61O00622 381 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 ARHGEF9O43307 516 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 PRKNO60260 465 aaPredicted RBP13.36□□□□□ -0.27
HDAC9-208ENST00000417496 BRINP1O60477 761 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 KCNJ13O60928 360 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 CDC123O75794 336 aaPredicted RBP13.36□□□□□ -0.27
HDAC9-208ENST00000417496 ATP1B1P05026 303 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 HIST1H1CP16403 213 aaKnown RBP13.36□□□□□ -0.27
HDAC9-208ENST00000417496 ATF1P18846 271 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 CXCL3P19876 107 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 GIFP27352 417 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 CRYZQ08257 329 aaKnown RBP13.36□□□□□ -0.27
HDAC9-208ENST00000417496 MGAT2Q10469 447 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 FHL1Q13642 323 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 PXKQ7Z7A4 578 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 SAMD14Q8IZD0 417 aaPredicted RBP13.36□□□□□ -0.27
HDAC9-208ENST00000417496 OR11H7Q8NGC8 314 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 BMFQ96LC9 184 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 ERMAPQ96PL5 475 aaPredicted RBP13.36□□□□□ -0.27
HDAC9-208ENST00000417496 PDCD1LG2Q9BQ51 273 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 C1QTNF7Q9BXJ2 289 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 MCCC2Q9HCC0 563 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 DUSP22Q9NRW4 184 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 ZNF222Q9UK12 451 aa13.36□□□□□ -0.27
HDAC9-208ENST00000417496 AK6Q9Y3D8 172 aaKnown RBP13.36□□□□□ -0.27
HDAC9-208ENST00000417496 CEP290O15078 2479 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 ALPK2Q86TB3 2170 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 A0A1W2PQF6 199 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 SC5DO75845 299 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 GPR75O95800 540 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 POU2F2P09086 479 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 ANKRD34CP0C6C1 535 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 ZNF3P17036 446 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 RAB3BP20337 219 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 RBMS1P29558 406 aaKnown RBP13.35□□□□□ -0.27
HDAC9-208ENST00000417496 FAM53BQ14153 422 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 ITPRIPL2Q3MIP1 535 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 ZNF542PQ5EBM4 170 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 ABHD13Q7L211 337 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 PLCZ1Q86YW0 608 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 SIAH3Q8IW03 269 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 OR52R1Q8NGF1 315 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 GCDHQ92947 438 aaPredicted RBP13.35□□□□□ -0.27
HDAC9-208ENST00000417496 SLC22A18Q96BI1 424 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 GSDMCQ9BYG8 508 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 TMEM27Q9HBJ8 222 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 BRD7Q9NPI1 651 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms