RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 GHSRQ92847 366 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 TMEM159Q96B96 161 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 PRRC1Q96M27 445 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 NDC1Q9BTX1 674 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 TAS2R10Q9NYW0 307 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 PLXNA3P51805 1871 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 GRXCR1A8MXD5 290 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 F5H5P2 479 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 CATP04040 527 aaKnown RBP13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 ACAA1P09110 424 aaPredicted RBP13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 EPXP11678 715 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 IFNGR2P38484 337 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 CCR2P41597 374 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 STAT5AP42229 794 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 DLX5P56178 289 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 MAT1AQ00266 395 aaKnown RBP13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 RBMS2Q15434 407 aaKnown RBP13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 RPE65Q16518 533 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 PGGHGQ32M88 737 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 CCDC157Q569K6 752 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 FCRLBQ6BAA4 426 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 C11orf96Q7Z7L8 435 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 CMTM8Q8IZV2 173 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 THAP6Q8TBB0 222 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 PDCD10Q9BUL8 212 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 GSN-AS1Q9NRJ2 163 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 P2RX2Q9UBL9 471 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 PLEKHM1Q9Y4G2 1056 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 A0A0G2JN53 185 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZNF821O75541 412 aaPredicted RBP13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 MT-ND5P03915 603 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 RD3LP0DJH9 198 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 CTSOP43234 321 aaPredicted RBP13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 CDKN3Q16667 212 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZNF528Q3MIS6 628 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 PLEKHS1Q5SXH7 462 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZNF626Q68DY1 528 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 ZCCHC12Q6PEW1 402 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 NRMQ8IXM6 262 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 PIGXQ8TBF5 258 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 SMPDL3AQ92484 453 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 TMPRSS13Q9BYE2 586 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 TMEM185BQ9H7F4 350 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 IL21Q9HBE4 155 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 TAS2R5Q9NYW4 299 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 EXOGQ9Y2C4 368 aaKnown RBP13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 KCNK7Q9Y2U2 307 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 NOSIPQ9Y314 301 aaKnown RBP13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 HCFC2Q9Y5Z7 792 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 PLXND1Q9Y4D7 1925 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 TRANK1O15050 2925 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 PYCARD-AS1I3L0S3 204 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 KRT33AO76009 404 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 KLHL18O94889 574 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 OR2A4O95047 310 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 EFEMP2O95967 443 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 ATP1B1P05026 303 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 CALCRP30988 508 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 CTNNB1P35222 781 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 TBPL1P62380 186 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 PRR5P85299 388 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 MANEAQ5SRI9 462 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 TPGS2Q68CL5 300 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 NKAIN4Q8IVV8 208 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 C1orf216Q8TAB5 229 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 LCORQ96JN0 433 aaPredicted RBP13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 OR2A7Q96R45 310 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 PITHD1Q9GZP4 211 aaPredicted RBP13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 SEMA4GQ9NTN9 838 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 C14orf105Q9NVL8 296 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 DYRK1BQ9Y463 629 aa13.64□□□□□ -0.23
NCKIPSD-204ENST00000416649 SLC16A5O15375 505 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 AKR7A3O95154 331 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 EPPINO95925 133 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 CRYBA1P05813 215 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 FUT1P19526 365 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 MAT2AP31153 395 aaKnown RBP13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 ART1P52961 327 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 AP3S2P59780 193 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 SNRPEP62304 92 aaKnown RBP13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 ATXN7L3Q14CW9 347 aaPredicted RBP13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 AKIRIN2Q53H80 203 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 CNTRLQ7Z7A1 2325 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 LINC00471Q8N535 108 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 HAVCR2Q8TDQ0 301 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 OSTF1Q92882 214 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 HCAR1Q9BXC0 346 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 KLHL9Q9P2J3 617 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 DENND4AQ7Z401 1863 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 PQLC2LA1A4F0 135 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 TTLL8A6PVC2 850 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 GNB5O14775 395 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 CPN1P15169 458 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 GALP22466 123 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 RFC3P40938 356 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 LUMP51884 338 aaPredicted RBP13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 LRRC37A5PQ49AS3 106 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 SPAG16Q8N0X2 631 aa13.63□□□□□ -0.23
NCKIPSD-204ENST00000416649 FAM98AQ8NCA5 519 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms