RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 PCDHGB4Q9UN71 923 aa13.41□□□□□ -0.26
UBXN4-203ENST00000416538 CSPG4Q6UVK1 2322 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 CCDC154A6NI56 674 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 GJE1A6NN92 205 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 RAMP1O60894 148 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 PGRP06401 933 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 FESP07332 822 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 RPS4Y1P22090 263 aaKnown RBP13.4□□□□□ -0.26
UBXN4-203ENST00000416538 SLC7A1P30825 629 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 DIO1P49895 249 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 MAGOHP61326 146 aaKnown RBP13.4□□□□□ -0.26
UBXN4-203ENST00000416538 NKX6-1P78426 367 aaPredicted RBP13.4□□□□□ -0.26
UBXN4-203ENST00000416538 MERTKQ12866 999 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 SYT14P1Q58G82 188 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 BEX5Q5H9J7 111 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 TMEM201Q5SNT2 666 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 BEND6Q5SZJ8 279 aaPredicted RBP13.4□□□□□ -0.26
UBXN4-203ENST00000416538 ZNF704Q6ZNC4 412 aaPredicted RBP13.4□□□□□ -0.26
UBXN4-203ENST00000416538 EIF3MQ7L2H7 374 aaKnown RBP13.4□□□□□ -0.26
UBXN4-203ENST00000416538 KIRREL3Q8IZU9 778 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 CIARTQ8N365 385 aaPredicted RBP13.4□□□□□ -0.26
UBXN4-203ENST00000416538 OR9I1Q8NGQ6 314 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 RAB3IL1Q8TBN0 382 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 PLPPR2Q96GM1 343 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 ARL5BQ96KC2 179 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 OR52B2Q96RD2 323 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 CCL19Q99731 98 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 PIP5K1AQ99755 562 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 OR11A1Q9GZK7 315 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 TMBIM4Q9HC24 238 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 CTPS2Q9NRF8 586 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 POLE3Q9NRF9 147 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 THAP1Q9NVV9 213 aa13.4□□□□□ -0.26
UBXN4-203ENST00000416538 ZANQ9Y493 2812 aa13.4□□□□□ -0.27
UBXN4-203ENST00000416538 CYTIPO60759 359 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 PRKD3O94806 890 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 PABPC4LP0CB38 370 aaKnown RBP13.39□□□□□ -0.27
UBXN4-203ENST00000416538 PPP3CBP16298 524 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 NTF4P34130 210 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 RYKP34925 604 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 TAB1Q15750 504 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 GPAT3Q53EU6 434 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 ATAD3BQ5T9A4 648 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 SPATA19Q7Z5L4 167 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 CROCCP2Q86T23 111 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 STK32CQ86UX6 486 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 LILRB1Q8NHL6 650 aaPredicted RBP13.39□□□□□ -0.27
UBXN4-203ENST00000416538 ZNF775Q96BV0 537 aaPredicted RBP13.39□□□□□ -0.27
UBXN4-203ENST00000416538 PERPQ96FX8 193 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 REXO5Q96IC2 774 aaKnown RBP13.39□□□□□ -0.27
UBXN4-203ENST00000416538 OR52E6Q96RD3 313 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 PANX1Q96RD7 426 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 GP6Q9HCN6 339 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 TIGARQ9NQ88 270 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 SLC35A3Q9Y2D2 325 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 GPR52Q9Y2T5 361 aa13.39□□□□□ -0.27
UBXN4-203ENST00000416538 AGR2O95994 175 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 ADAP00813 363 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 YES1P07947 543 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 PGCP20142 388 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 OR3A2P47893 321 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 SLC18A1P54219 525 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 KCNJ10P78508 379 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 PDCD4Q53EL6 469 aaKnown RBP13.38□□□□□ -0.27
UBXN4-203ENST00000416538 SFRP5Q5T4F7 317 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 GTF2IRD2BQ6EKJ0 949 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 C20orf204Q6ZNR8 217 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 TMPPEQ6ZT21 453 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 Q71RC1 249 aaPredicted RBP13.38□□□□□ -0.27
UBXN4-203ENST00000416538 GTF2IRD2Q86UP8 949 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 LRRC75A-AS1Q8N1F1 130 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 SLC43A2Q8N370 569 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 VPS37AQ8NEZ2 397 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 OIT3Q8WWZ8 545 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 NEUROG1Q92886 237 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 VPS33AQ96AX1 596 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 AURKBQ96GD4 344 aaPredicted RBP13.38□□□□□ -0.27
UBXN4-203ENST00000416538 OR10A4Q9H209 315 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 EXOSC3Q9NQT5 275 aaKnown RBP13.38□□□□□ -0.27
UBXN4-203ENST00000416538 KLHL9Q9P2J3 617 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 CHRNA9Q9UGM1 479 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 DSPPQ9NZW4 1301 aa13.38□□□□□ -0.27
UBXN4-203ENST00000416538 HEATR1Q9H583 2144 aaKnown RBP13.37□□□□□ -0.27
UBXN4-203ENST00000416538 ABCA2Q9BZC7 2435 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 ZC3H12DA2A288 527 aaKnown RBP13.37□□□□□ -0.27
UBXN4-203ENST00000416538 AGAP5A6NIR3 686 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 ZNF716A6NP11 495 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 SMPD2O60906 423 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 LYZL6O75951 148 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 FOSL1P15407 271 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 COX5AP20674 150 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 RASGEF1BQ0VAM2 473 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 MRPL2Q5T653 305 aaKnown RBP13.37□□□□□ -0.27
UBXN4-203ENST00000416538 SHEQ5VZ18 495 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 ALKBH2Q6NS38 261 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 GRINAQ7Z429 371 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 ADGRG3Q86Y34 549 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 TMEM234Q8WY98 164 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 PIGTQ969N2 578 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 ARL8AQ96BM9 186 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms