RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 FER1L5A0AVI2 2057 aa10.69□□□□□ -0.7
RFFL-205ENST00000415395 IGLV3-12A0A075B6K2 115 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 IGKV3D-11A0A0A0MRZ8 115 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 B4DXG7 233 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 CASKO14936 926 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 ORC5O43913 435 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 PRAMEF2O60811 474 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 CDC123O75794 336 aaPredicted RBP10.68□□□□□ -0.7
RFFL-205ENST00000415395 ALX3O95076 343 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 NKX2-2O95096 273 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 RORAP35398 523 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 ETV5P41161 510 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 OR1D4P47884 311 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 MTNR1AP48039 350 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 ETV1P50549 477 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 BTG2P78543 158 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 FUT7Q11130 342 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 FOXD4Q12950 439 aaPredicted RBP10.68□□□□□ -0.7
RFFL-205ENST00000415395 ZNHIT3Q15649 155 aaPredicted RBP10.68□□□□□ -0.7
RFFL-205ENST00000415395 DUSP5Q16690 384 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 BICRALQ6AI39 1079 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 TCEAL6Q6IPX3 200 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 MRGPREQ86SM8 312 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 PPP1R3BQ86XI6 285 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 SHISA5Q8N114 240 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 KLHL36Q8N4N3 616 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 OR7G1Q8NGA0 311 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 OR52R1Q8NGF1 315 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 RHBDD1Q8TEB9 315 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 UBASH3BQ8TF42 649 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 SLC9A6Q92581 669 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 OSTF1Q92882 214 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 TCEAL3Q969E4 200 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 C11orf54Q9H0W9 315 aaPredicted RBP10.68□□□□□ -0.7
RFFL-205ENST00000415395 MIXL1Q9H2W2 232 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 MTHFD2LQ9H903 347 aaPredicted RBP10.68□□□□□ -0.7
RFFL-205ENST00000415395 RPRD1BQ9NQG5 326 aaKnown RBP10.68□□□□□ -0.7
RFFL-205ENST00000415395 RBFOX1Q9NWB1 397 aaKnown RBP10.68□□□□□ -0.7
RFFL-205ENST00000415395 PAQR5Q9NXK6 330 aaPredicted RBP10.68□□□□□ -0.7
RFFL-205ENST00000415395 KLHL28Q9NXS3 571 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 KCNE3Q9Y6H6 103 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 ZNF318Q5VUA4 2279 aa10.68□□□□□ -0.7
RFFL-205ENST00000415395 COL27A1Q8IZC6 1860 aaPredicted RBP10.68□□□□□ -0.7
RFFL-205ENST00000415395 KDM4EB2RXH2 506 aaPredicted RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 CYC1P08574 325 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 FGF5P12034 268 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 MAOAP21397 527 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 MMP11P24347 488 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 PRKAR1BP31321 381 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 CHRNEQ04844 493 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 ACSM1Q08AH1 577 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 TSPAN31Q12999 210 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 RIN1Q13671 783 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 ERV3-1Q14264 604 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 SF3A2Q15428 464 aaKnown RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 ZMAT1Q5H9K5 638 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 PHF19Q5T6S3 580 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 TYW3Q6IPR3 259 aaKnown RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 CD200R1LQ6Q8B3 271 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 RASSF6Q6ZTQ3 369 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 PRICKLE2Q7Z3G6 844 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 AGBL5Q8NDL9 886 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 RCBTB1Q8NDN9 531 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 TOR1AIP2Q8NFQ8 470 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 PIGXQ8TBF5 258 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 CDS1Q92903 461 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 DMRTB1Q96MA1 342 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 PTCHD1Q96NR3 888 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 ZNF350Q9GZX5 532 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 SAP130Q9H0E3 1048 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 KCNN2Q9H2S1 579 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 EVA1AQ9H8M9 152 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 C14orf105Q9NVL8 296 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 ASB6Q9NWX5 421 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 PRODH2Q9UF12 536 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 ASCC3Q8N3C0 2202 aaKnown RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 NINQ8N4C6 2090 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 SEC16AO15027 2179 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 LINC00854A0A1B0GVQ3 168 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 TCRBV16S1A1N1A0A5B0 115 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 PLD2O14939 933 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 HYAL3O43820 417 aaPredicted RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 STX11O75558 287 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 SCRG1O75711 98 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 TP53P04637 393 aaPredicted RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 THBS1P07996 1170 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 CCKBRP32239 447 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 STAT5AP42229 794 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 EMDP50402 254 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 TAS2R41P59536 307 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 POU6F2P78424 691 aaPredicted RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 BDH1Q02338 343 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 ST3GAL3Q11203 375 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 ZNF155Q12901 538 aaPredicted RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 MRPL28Q13084 256 aaKnown RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 PIN1Q13526 163 aaPredicted RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 EXOSC7Q15024 291 aaKnown RBP10.67□□□□□ -0.7
RFFL-205ENST00000415395 YIF1BQ5BJH7 314 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 DCST2Q5T1A1 773 aa10.67□□□□□ -0.7
RFFL-205ENST00000415395 FRRS1Q6ZNA5 592 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms