RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 LSM12Q3MHD2 195 aaKnown RBP12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 B3GLCTQ6Y288 498 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 MTDHQ86UE4 582 aaKnown RBP12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 IFT20Q8IY31 132 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 OR5D16Q8NGK9 328 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 PSMA8Q8TAA3 256 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ST8SIA1Q92185 356 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 OR7D2Q96RA2 312 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 C1QTNF6Q9BXI9 259 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 LAT2Q9GZY6 243 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 EMC3Q9P0I2 261 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 LPAR3Q9UBY5 353 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 NOSIPQ9Y314 301 aaKnown RBP12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 SLC25A15Q9Y619 301 aa12.54□□□□□ -0.4
HLA-DQB2-229ENST00000411527 IGKV3D-15A0A087WSY6 115 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TMEM233B4DJY2 109 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 H7C417 338 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 PIP5K1BO14986 540 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 CFLARO15519 480 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TRIM13O60858 407 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 PEX11AO75192 247 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 C8BP07358 591 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 FGF4P08620 206 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TFPIP10646 304 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 MAPK1P28482 360 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 PTGR1Q14914 329 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 PDK3Q15120 406 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 UGT3A2Q3SY77 523 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 SYT14P1Q58G82 188 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ARIH2OSQ8N7S6 290 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 OR5AK3PQ8NH89 298 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 SFXN5Q8TD22 340 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 C10orf105Q8TEF2 133 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TWIST2Q8WVJ9 160 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TMEM234Q8WY98 164 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 APH1AQ96BI3 265 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 MOAP1Q96BY2 351 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 PPP3R2Q96LZ3 170 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TRMOQ9BU70 441 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TXLNGYQ9BZA5 131 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 AMBRA1Q9C0C7 1298 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 NMUR2Q9GZQ4 415 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ATAD3AQ9NVI7 634 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ASB6Q9NWX5 421 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 KCNE5Q9UJ90 142 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 TRAF6Q9Y4K3 522 aa12.53□□□□□ -0.4
HLA-DQB2-229ENST00000411527 ZNF716A6NP11 495 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 LMX1BO60663 402 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FCMRO60667 390 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 DNAJA2O60884 412 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CSTAP01040 98 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CHRNGP07510 517 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 UBTFL6P0CB48 400 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ZNF16P17020 682 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PGCP20142 388 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 USF1P22415 310 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 NTF4P34130 210 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 EFNA4P52798 201 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FOXG1P55316 489 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 RPS26P62854 115 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 LSM11P83369 360 aaKnown RBP eCLIP12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CHRNB3Q05901 458 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PCLAFQ15004 111 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ZNF141Q15928 474 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 GABRA6Q16445 453 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ABLIM2Q6H8Q1 611 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ZNF544Q6NX49 715 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 OLIG3Q7RTU3 272 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 KRTCAP2Q8N6L1 136 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 NATD1Q8N6N6 113 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SLC25A43Q8WUT9 341 aaPredicted RBP12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PROX1Q92786 737 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 COQ8BQ96D53 544 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ZHX1-C8orf76Q96EF9 292 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 DNAJA3Q96EY1 480 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MUS81Q96NY9 551 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PRPF18Q99633 342 aaKnown RBP12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 INPP5KQ9BT40 448 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C1orf50Q9BV19 199 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ACER3Q9NUN7 267 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 TAS2R16Q9NYV7 291 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MID2Q9UJV3 735 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MKLN1Q9UL63 735 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ATP23Q9Y6H3 246 aa12.52□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CENPVL1A0A0U1RR11 272 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SMIM23A6NLE4 172 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 DUXAA6NLW8 204 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 GPR171O14626 319 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MRPL33O75394 65 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 STX11O75558 287 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 LYPLA1O75608 230 aaPredicted RBP12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 UGT2B17O75795 530 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SHBGP04278 402 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 BMP4P12644 408 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 KRT4P19013 534 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MATN1P21941 496 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SOAT1P35610 550 aa12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 APOBEC1P41238 236 aaKnown RBP12.51□□□□□ -0.41
HLA-DQB2-229ENST00000411527 HBA1P69905 142 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms