RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MERTKQ12866 999 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 PDK3Q15120 406 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 FAM153CQ494X1 144 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 C11orf71Q6IPW1 123 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 MTDHQ86UE4 582 aaKnown RBP14.72□□□□□ -0.05
MRPL55-220ENST00000411464 ZNF525Q8N782 197 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 SFXN5Q8TD22 340 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 TWIST2Q8WVJ9 160 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 TMEM234Q8WY98 164 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 ZHX1-C8orf76Q96EF9 292 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 PPP3R2Q96LZ3 170 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 OR7D2Q96RA2 312 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 SDF2Q99470 211 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 GATA5Q9BWX5 397 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-220ENST00000411464 SHARPINQ9H0F6 387 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 MANSC1Q9H8J5 431 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 ASB6Q9NWX5 421 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 TRAF6Q9Y4K3 522 aa14.72□□□□□ -0.05
MRPL55-220ENST00000411464 IGKV3D-15A0A087WSY6 115 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 DUXAA6NLW8 204 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 H7C417 338 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 M0R1B8 84 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 PIP5K1BO14986 540 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 PEX11AO75192 247 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 LYPLA1O75608 230 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-220ENST00000411464 FGF4P08620 206 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 TFPIP10646 304 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 PGCP20142 388 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 GPR68Q15743 365 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 SYT14P1Q58G82 188 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 OR7E24Q6IFN5 339 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 ZNF544Q6NX49 715 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 OR5D16Q8NGK9 328 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 SLC25A43Q8WUT9 341 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-220ENST00000411464 PROX1Q92786 737 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 COQ8BQ96D53 544 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 INPP5KQ9BT40 448 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 NMUR2Q9GZQ4 415 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 SLC25A15Q9Y619 301 aa14.71□□□□□ -0.05
MRPL55-220ENST00000411464 SPIN1Q9Y657 262 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-220ENST00000411464 A0A1W2PR80 420 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 TMEM233B4DJY2 109 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 GPR171O14626 319 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 DNAJA2O60884 412 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 MRPL33O75394 65 aaKnown RBP14.7□□□□□ -0.06
MRPL55-220ENST00000411464 STX11O75558 287 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 AK1P00568 194 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 CSTAP01040 98 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 C8BP07358 591 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 CSF3P09919 207 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 KRT4P19013 534 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 USF1P22415 310 aaPredicted RBP14.7□□□□□ -0.06
MRPL55-220ENST00000411464 CHRNB3Q05901 458 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 SPOCK1Q08629 439 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 SKP2Q13309 424 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 PTGR1Q14914 329 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 ZNF141Q15928 474 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 UGT3A2Q3SY77 523 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 EIF3MQ7L2H7 374 aaKnown RBP14.7□□□□□ -0.06
MRPL55-220ENST00000411464 OR5AK3PQ8NH89 298 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 C1QTNF6Q9BXI9 259 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 TXLNGYQ9BZA5 131 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 EML4Q9HC35 981 aaKnown RBP14.7□□□□□ -0.06
MRPL55-220ENST00000411464 ACER3Q9NUN7 267 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 TAS2R16Q9NYV7 291 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 ATP23Q9Y6H3 246 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 PMF1-BGLAPU3KQ54 211 aa14.7□□□□□ -0.06
MRPL55-220ENST00000411464 NBEAL1Q6ZS30 2694 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 SMIM23A6NLE4 172 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 LMX1BO60663 402 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 FCMRO60667 390 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 CHRNGP07510 517 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 UBTFL6P0CB48 400 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-220ENST00000411464 PRPS1L1P21108 318 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 MATN1P21941 496 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 SOAT1P35610 550 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 APOBEC1P41238 236 aaKnown RBP14.69□□□□□ -0.06
MRPL55-220ENST00000411464 EFNA4P52798 201 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 PCLAFQ15004 111 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 KRTAP24-1Q3LI83 254 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 ATP6AP1LQ52LC2 224 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 ABLIM2Q6H8Q1 611 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 B3GLCTQ6Y288 498 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 C4orf33Q8N1A6 199 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 KRTCAP2Q8N6L1 136 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 PIGXQ8TBF5 258 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 C10orf105Q8TEF2 133 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 MUS81Q96NY9 551 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 C1orf50Q9BV19 199 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 FKRPQ9H9S5 495 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 GIMAP2Q9UG22 337 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 MKLN1Q9UL63 735 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 CR1P17927 2039 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 CADP27708 2225 aa14.69□□□□□ -0.06
MRPL55-220ENST00000411464 ZNF716A6NP11 495 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 ANKRD28O15084 1053 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 SLU7O95391 586 aaKnown RBP14.68□□□□□ -0.06
MRPL55-220ENST00000411464 SHBGP04278 402 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 IGHV4-31P0DP07 118 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 FKBP2P26885 142 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms