RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 ANKUB1A6NFN9 424 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 LRRC3CA6NJW4 275 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 SAC3D1A6NKF1 404 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 GNGT2O14610 69 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 NME2P1O60361 137 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 TRAPPC6AO75865 159 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 CST1P01037 141 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 CELA3AP09093 270 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 HK1P19367 917 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 IL11P20809 199 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 NME2P22392 152 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 MST1P26927 711 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 RRM2P31350 389 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 CDH12P55289 794 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 SESN3P58005 492 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 SPIBQ01892 262 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 PLGLB1Q02325 96 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 SNTA1Q13424 505 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 CBFBQ13951 182 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 QPRTQ15274 297 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 RNFT1Q5M7Z0 435 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 FBXW10Q5XX13 1052 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 TIGD3Q6B0B8 471 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 TBPL2Q6SJ96 375 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 ZNF550Q7Z398 422 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 GDF7Q7Z4P5 450 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 YRDCQ86U90 279 aaKnown RBP7.57□□□□□ -1.2
GPC3-203ENST00000406757 RANBP3LQ86VV4 465 aaPredicted RBP7.57□□□□□ -1.2
GPC3-203ENST00000406757 PLCZ1Q86YW0 608 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 GRAMD2AQ8IUY3 354 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 NKAIN4Q8IVV8 208 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 CMIPQ8IY22 773 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 C10orf67Q8IYJ2 551 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 HS3ST5Q8IZT8 346 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 ICA1LQ8NDH6 482 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 ATP6V1C2Q8NEY4 427 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 TOR1AIP2Q8NFQ8 470 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 OR5W2Q8NH69 310 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 PHF10Q8WUB8 498 aaKnown RBP7.57□□□□□ -1.2
GPC3-203ENST00000406757 NTNG2Q96CW9 530 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 SCMH1Q96GD3 660 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 SLC41A3Q96GZ6 507 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 TMEM41AQ96HV5 264 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 FAM173AQ9BQD7 235 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 RNF32Q9H0A6 362 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 TMEM27Q9HBJ8 222 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 ARMC1Q9NVT9 282 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 RIMS3Q9UJD0 308 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 SLC7A7Q9UM01 511 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 FAM32AQ9Y421 112 aaKnown RBP7.57□□□□□ -1.2
GPC3-203ENST00000406757 MAGED1Q9Y5V3 778 aaPredicted RBP7.57□□□□□ -1.2
GPC3-203ENST00000406757 MYO9AB2RTY4 2548 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 HEATR5AQ86XA9 2040 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 NOTCH2Q04721 2471 aa7.57□□□□□ -1.2
GPC3-203ENST00000406757 SPTBN1Q01082 2364 aaKnown RBP7.56□□□□□ -1.2
GPC3-203ENST00000406757 NCKAP5O14513 1909 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 TRAV17A0A0B4J275 112 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 TRBV4-1A0A0J9YWV2 114 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 ANKRD33BA6NCL7 494 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 CLOCKO15516 846 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 ZNHIT1O43257 154 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 HNRNPRO43390 633 aaKnown RBP7.56□□□□□ -1.2
GPC3-203ENST00000406757 MGRN1O60291 552 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 PIP5K1CO60331 668 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 PRSS23O95084 383 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 SNX4O95219 450 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 LYPD3O95274 346 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 ATP6V1G2O95670 118 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 ANPEPP15144 967 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 PGCP20142 388 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 PRKACGP22612 351 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 FASP25445 335 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 GDF1P27539 372 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 TACR3P29371 465 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 MAGEA2P43356 314 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 COPZ1P61923 177 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 FOXO1Q12778 655 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 FOXF1Q12946 379 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 ESPL1Q14674 2120 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 EXOC3L2Q2M3D2 409 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 WIPI1Q5MNZ9 446 aaPredicted RBP7.56□□□□□ -1.2
GPC3-203ENST00000406757 LPCAT4Q643R3 524 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 OR2T5Q6IEZ7 315 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 TMEM81Q6P7N7 255 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 AAGABQ6PD74 315 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 WDR88Q6ZMY6 472 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 PIWIL3Q7Z3Z3 882 aaKnown RBP7.56□□□□□ -1.2
GPC3-203ENST00000406757 CYP4Z1Q86W10 505 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 MISPQ8IVT2 679 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 ZNF440Q8IYI8 595 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 FADS6Q8N9I5 356 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 OR2T29Q8NH02 315 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 POC1BQ8TC44 478 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 ADAMTS16Q8TE57 1224 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 C1GALT1C1Q96EU7 318 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 ZNF597Q96LX8 424 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 FRMD6Q96NE9 622 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 PIP5K1AQ99755 562 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 ZNF559Q9BR84 538 aa7.56□□□□□ -1.2
GPC3-203ENST00000406757 FNDC11Q9BVV2 318 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms