RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 BCL2A1Q16548 175 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 IFI44LQ53G44 452 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 WLSQ5T9L3 541 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 FAM86B1Q8N7N1 296 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 GEMIN6Q8WXD5 167 aaKnown RBP26.46■■□□□ 1.83
USP42-202ENST00000404008 WDYHV1Q96HA8 205 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 PNPLA3Q9NST1 481 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 OSGIN1Q9UJX0 560 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 PRKD3O94806 890 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 TPOP07202 933 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 GNLYP22749 145 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 C3AR1Q16581 482 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 MTX3Q5HYI7 312 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 EMC4Q5J8M3 183 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 POMZP3Q6PJE2 187 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 FKBP9P1Q75LS8 142 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 LILRA2Q8N149 483 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 OR5M9Q8NGP3 310 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 C3orf49Q96BT1 292 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 TMEM185BQ9H7F4 350 aa26.46■■□□□ 1.83
USP42-202ENST00000404008 RP1L1Q8IWN7 2480 aaPredicted RBP26.45■■□□□ 1.83
USP42-202ENST00000404008 A0A1B0GWA3 101 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 UQCRFS1P47985 274 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 KCNC4Q03721 635 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 OR1Q1Q15612 314 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 ZNF800Q2TB10 664 aaPredicted RBP eCLIP26.45■■□□□ 1.82
USP42-202ENST00000404008 GXYLT1Q4G148 440 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 ENTPD8Q5MY95 495 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 C3orf33Q6P1S2 294 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 YTHDF3Q7Z739 585 aaKnown RBP26.45■■□□□ 1.82
USP42-202ENST00000404008 GGNQ86UU5 652 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 CD163Q86VB7 1156 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 ADGRG3Q86Y34 549 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 PM20D2Q8IYS1 436 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 PHF10Q8WUB8 498 aaKnown RBP26.45■■□□□ 1.82
USP42-202ENST00000404008 SMPDL3BQ92485 455 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 TMEM27Q9HBJ8 222 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 STOML1Q9UBI4 398 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 RPS6KB2Q9UBS0 482 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 CHRNA9Q9UGM1 479 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 SLC7A8Q9UHI5 535 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 CAMK2AQ9UQM7 478 aa26.45■■□□□ 1.82
USP42-202ENST00000404008 TMED7-TICAM2A0A0A6YYA0 188 aa26.44■■□□□ 1.82
USP42-202ENST00000404008 PRRG2O14669 202 aa26.44■■□□□ 1.82
USP42-202ENST00000404008 CLDN20P56880 219 aa26.44■■□□□ 1.82
USP42-202ENST00000404008 TSPYL5Q86VY4 417 aaPredicted RBP26.44■■□□□ 1.82
USP42-202ENST00000404008 PYURFQ96I23 114 aa26.44■■□□□ 1.82
USP42-202ENST00000404008 SERINC1Q9NRX5 453 aa26.44■■□□□ 1.82
USP42-202ENST00000404008 OSGIN2Q9Y236 505 aa26.44■■□□□ 1.82
USP42-202ENST00000404008 POMPQ9Y244 141 aa26.44■■□□□ 1.82
USP42-202ENST00000404008 TMED7Q9Y3B3 224 aa26.44■■□□□ 1.82
USP42-202ENST00000404008 V9GYQ6 96 aa26.44■■□□□ 1.82
USP42-202ENST00000404008 UBR5O95071 2799 aaPredicted RBP26.43■■□□□ 1.82
USP42-202ENST00000404008 A0A0B4J2E0 115 aa26.43■■□□□ 1.82
USP42-202ENST00000404008 A0A1B0GX12 115 aa26.43■■□□□ 1.82
USP42-202ENST00000404008 CPSF4LA6NMK7 179 aaKnown RBP26.43■■□□□ 1.82
USP42-202ENST00000404008 SEMA7AO75326 666 aa26.43■■□□□ 1.82
USP42-202ENST00000404008 IFNW1P05000 195 aa26.43■■□□□ 1.82
USP42-202ENST00000404008 SUCLG1P53597 346 aaKnown RBP26.43■■□□□ 1.82
USP42-202ENST00000404008 CLDN15P56746 228 aa26.43■■□□□ 1.82
USP42-202ENST00000404008 ZNF613Q6PF04 617 aa26.43■■□□□ 1.82
USP42-202ENST00000404008 DEF8Q6ZN54 512 aa26.43■■□□□ 1.82
USP42-202ENST00000404008 ATG4DQ86TL0 474 aaPredicted RBP26.43■■□□□ 1.82
USP42-202ENST00000404008 DOLPP1Q86YN1 238 aa26.43■■□□□ 1.82
USP42-202ENST00000404008 UBQLNLQ8IYU4 475 aa26.43■■□□□ 1.82
USP42-202ENST00000404008 DNAJA4Q8WW22 397 aaPredicted RBP26.43■■□□□ 1.82
USP42-202ENST00000404008 AMBRA1Q9C0C7 1298 aa26.43■■□□□ 1.82
USP42-202ENST00000404008 TCRBV5S2A0A599 114 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 H0YC42 278 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 STAMBPO95630 424 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 OPN1LWP04000 364 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 SHC1P29353 583 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 TPD52P55327 224 aaPredicted RBP26.42■■□□□ 1.82
USP42-202ENST00000404008 SRYQ05066 204 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 ALG10BQ5I7T1 473 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 ULK3Q6PHR2 472 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 MEIOBQ8N635 442 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 ATP6V1C2Q8NEY4 427 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 ADAMTS16Q8TE57 1224 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 C12orf10Q9HB07 376 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 TINAGQ9UJW2 476 aa26.42■■□□□ 1.82
USP42-202ENST00000404008 SPIN1Q9Y657 262 aaPredicted RBP26.42■■□□□ 1.82
USP42-202ENST00000404008 POLEQ07864 2286 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 GJE1A6NN92 205 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 SEC14L5O43304 696 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 SEMG1P04279 462 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 STSP08842 583 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 PLA2G2AP14555 144 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 CXCR1P25024 350 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 SFTPDP35247 375 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 MAP2K6P52564 334 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 ZNF585AQ6P3V2 769 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 LSRQ86X29 649 aaPredicted RBP26.41■■□□□ 1.82
USP42-202ENST00000404008 SLC25A43Q8WUT9 341 aaPredicted RBP26.41■■□□□ 1.82
USP42-202ENST00000404008 LRGUKQ96M69 825 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 KLHL15Q96M94 604 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 TRIM15Q9C019 465 aa26.41■■□□□ 1.82
USP42-202ENST00000404008 POLR2J2Q9GZM3 115 aaKnown RBP26.41■■□□□ 1.82
USP42-202ENST00000404008 POLR2J3Q9H1A7 115 aaKnown RBP26.41■■□□□ 1.82
USP42-202ENST00000404008 TMEM72A0PK05 275 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms