RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 COL6A3P12111 3177 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 ETS1P14921 441 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 ATP6V1B1P15313 513 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 H2AFXP16104 143 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 OPRD1P41143 372 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 MAGEA3P43357 314 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 TNFRSF4P43489 277 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 GEMP55040 296 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 PLTPP55058 493 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 UCP2P55851 309 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 RPL26P61254 145 aaKnown RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 AP1S1P61966 158 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 VSNL1P62760 191 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 BASP1P80723 227 aaKnown RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 LCP2Q13094 533 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 ENPP2Q13822 863 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 KIAA0141Q14154 515 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZNF235Q14590 738 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 CYTH1Q15438 398 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 SPHARQ15513 63 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRIP13Q15645 432 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 LINC00523Q86TU6 105 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZFAND4Q86XD8 727 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 CACUL1Q86Y37 369 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 PDIK1LQ8N165 341 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 MREGQ8N565 214 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 FBXO25Q8TCJ0 367 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 AENQ8WTP8 325 aaKnown RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 PRCCQ92733 491 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 LRRC39Q96DD0 335 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 IMP4Q96G21 291 aaKnown RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 C5orf30Q96GV9 206 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 PKNOX2Q96KN3 472 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 FMO2Q99518 471 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 C19orf43Q9BQ61 176 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 NAT9Q9BTE0 207 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 RPP25Q9BUL9 199 aaKnown RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 RSPH9Q9H1X1 276 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 DPH5Q9H2P9 285 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 PARLQ9H300 379 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 PCNX3Q9H6A9 2034 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZDHHC6Q9H6R6 413 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 LRRC40Q9H9A6 602 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 MID1IP1Q9NPA3 183 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 NT5MQ9NPB1 228 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 GTSE1Q9NYZ3 720 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 LHX3Q9UBR4 397 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 FAM153AQ9UHL3 310 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 RSPH14Q9UHP6 348 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 PLXNB3Q9ULL4 1909 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 RPL26L1Q9UNX3 145 aaKnown RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 SNX24Q9Y343 169 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 RNF215Q9Y6U7 377 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 V9GYY5 206 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 UNC80Q8N2C7 3258 aa4.08□□□□□ -1.76
HMGB3P19-201ENST00000403971 PI4KAP42356 2102 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 EML5Q05BV3 1969 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 A0A1B0GU03 582 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 LOC285095A0A1B0GVY8 99 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 ATP6AP2A0A1C7CYW4 349 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 WASH3PC4AMC7 463 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 SPECC1L-ADORA2AF8WAN1 911 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 ALOX15BO15296 676 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 TNFSF12O43508 249 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 MTRF1O75570 445 aaKnown RBP4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 POP4O95707 220 aaKnown RBP4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 IGSF6O95976 241 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 LYNP07948 512 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 THEGLP0DJG4 465 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 IL9P15248 144 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 HLA-DPA1P20036 260 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 ADRA1AP35348 466 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 NPY2RP49146 381 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 TNFSF10P50591 281 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 RHOAP61586 193 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 MRPS25P82663 173 aaKnown RBP4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 RAD51Q06609 339 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 CDH17Q12864 832 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRADDQ15628 312 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 HFEQ30201 348 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 HNRNPA1L2Q32P51 320 aaKnown RBP4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 BEND6Q5SZJ8 279 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 TMEM215Q68D42 235 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 NEPROQ6NW34 567 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 C22orf39Q6P5X5 142 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 LRRC8BQ6P9F7 803 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 KDELC1Q6UW63 502 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 CYS1Q717R9 158 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 CENPUQ71F23 418 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 TRMT10CQ7L0Y3 403 aaKnown RBP4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 KCNMB4Q86W47 210 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 CNPY4Q8N129 248 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 OR2AP1Q8NGE2 309 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 MIPOL1Q8TD10 442 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 LIPHQ8WWY8 451 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 IFT81Q8WYA0 676 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 ANKRD7Q92527 254 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 HAS2Q92819 552 aa4.07□□□□□ -1.76
HMGB3P19-201ENST00000403971 PEX13Q92968 403 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms