RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 MRI1Q9BV20 369 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 C1QTNF6Q9BXI9 259 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 IER3IP1Q9Y5U9 82 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 SLC5A10A0PJK1 596 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 GAPDHSO14556 408 aaPredicted RBP13□□□□□ -0.33
HMGA2-204ENST00000403681 PRKRAO75569 313 aaKnown RBP13□□□□□ -0.33
HMGA2-204ENST00000403681 RAB3DO95716 219 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 UBBP0CG47 229 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 UBCP0CG48 685 aaKnown RBP13□□□□□ -0.33
HMGA2-204ENST00000403681 C6P13671 934 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 IFNGR1P15260 489 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 DLSTP36957 453 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 ACTBP60709 375 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 ERVK-21P61565 698 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 RPS27AP62979 156 aaKnown RBP13□□□□□ -0.33
HMGA2-204ENST00000403681 UBA52P62987 128 aaKnown RBP13□□□□□ -0.33
HMGA2-204ENST00000403681 ACTG1P63261 375 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 SIM1P81133 766 aaPredicted RBP13□□□□□ -0.33
HMGA2-204ENST00000403681 RNF170Q96K19 258 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 SRMSQ9H3Y6 488 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 AUNIPQ9H7T9 357 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 GPN3Q9UHW5 284 aaPredicted RBP13□□□□□ -0.33
HMGA2-204ENST00000403681 MCIDASD6RGH6 385 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 ALG10BQ5I7T1 473 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 HLA-DQA1Q5Y7H0 255 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 OR5M10Q6IEU7 315 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 OR4E2Q8NGC2 313 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 OR5AK2Q8NH90 309 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 ARL11Q969Q4 196 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 SYT4Q9H2B2 425 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 DPEP2Q9H4A9 486 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 LIN7BQ9HAP6 207 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 NOX4Q9NPH5 578 aa13□□□□□ -0.33
HMGA2-204ENST00000403681 RBBP6Q7Z6E9 1792 aaKnown RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 MIA3Q5JRA6 1907 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 NPIPA5A0A0B4J1W7 369 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 NPIPA7E9PJI5 369 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 ADRB1P08588 477 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 AKAIN1P0CW23 69 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 NPIPA8P0DM63 369 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 ZNF14P17017 642 aaPredicted RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 FRKP42685 505 aaPredicted RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 ENPP2Q13822 863 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 DEFB134Q4QY38 66 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 RPL22L1Q6P5R6 122 aaKnown RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 KIAA1324Q6UXG2 1013 aaKnown RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 ZNF620Q6ZNG0 422 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 OR13C5Q8NGS8 318 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 FBXW5Q969U6 566 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 RELTQ969Z4 430 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 TEAD3Q99594 435 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 SPHK2Q9NRA0 654 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 CLEC4EQ9ULY5 219 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 HS3ST2Q9Y278 367 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 TBC1D3KA0A087X1G2 549 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 SERTM1A2A2V5 107 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 TBC1D3FA6NER0 549 aaPredicted RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 RFXAPO00287 272 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 SURF4O15260 269 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 FXYD6P3P58550 94 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 FOXK2Q01167 660 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 CRHR2Q13324 411 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 LGALSLQ3ZCW2 172 aaPredicted RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 TBC1D3GQ6DHY5 549 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 ZNF584Q8IVC4 421 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 GLB1L2Q8IW92 636 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 ZNF248Q8NDW4 579 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 SFXN5Q8TD22 340 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 METTL8Q9H825 291 aaKnown RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 HRASLSQ9HDD0 168 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 SLC6A20Q9NP91 592 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 FANCFQ9NPI8 374 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 MRPS33Q9Y291 106 aaKnown RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 ZNF443Q9Y2A4 671 aaPredicted RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 CLEC3AO75596 197 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 NDUFB2O95178 105 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 LDOC1O95751 146 aaPredicted RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 CD79BP40259 229 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 AQP2P41181 271 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 TRA2BP62995 288 aaKnown RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 BDH1Q02338 343 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 ZNF750Q32MQ0 723 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 LIX1LQ8IVB5 337 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 GPR137Q96N19 417 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 CNTNAP3BQ96NU0 1288 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 LMF1Q96S06 567 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 S100A13Q99584 98 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 RNF32Q9H0A6 362 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 DNTTIP1Q9H147 329 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 MRTO4Q9UKD2 239 aaKnown RBP12.99□□□□□ -0.33
HMGA2-204ENST00000403681 NTNG1Q9Y2I2 539 aa12.99□□□□□ -0.33
HMGA2-204ENST00000403681 TBC1D3EA0A087X179 549 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 GLTPD2A6NH11 291 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 GABARAPH6UMI1 98 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 GPRIN2O60269 458 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 GCM2O75603 506 aaPredicted RBP12.98□□□□□ -0.33
HMGA2-204ENST00000403681 SBK2P0C263 348 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 MVDP53602 400 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 RNLSQ5VYX0 342 aa12.98□□□□□ -0.33
HMGA2-204ENST00000403681 FAM180AQ6UWF9 173 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms