RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 TLR9Q9NR96 1032 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 MED16Q9Y2X0 877 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
RERE-204ENST00000400908 TBPP20226 339 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 MPEG1Q2M385 716 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 DEFB134Q4QY38 66 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 C16orf70Q9BSU1 422 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 C11orf84Q9BUA3 381 aaPredicted RBP13.03□□□□□ -0.32
RERE-204ENST00000400908 HRASLSQ9HDD0 168 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 DUSP22Q9NRW4 184 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 PLSCR5A0PG75 271 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 ADH1BP00325 375 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 STK19P49842 368 aaPredicted RBP13.03□□□□□ -0.32
RERE-204ENST00000400908 ATP1B3P54709 279 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 TMEM115Q12893 351 aaPredicted RBP13.03□□□□□ -0.32
RERE-204ENST00000400908 SF3B4Q15427 424 aaKnown RBP eCLIP13.03□□□□□ -0.323e-9■■■■■ 41.1
RERE-204ENST00000400908 ZNF718Q3SXZ3 478 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 MS4A13Q5J8X5 152 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 ENPP6Q6UWR7 440 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 GIMAP1Q8WWP7 306 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 YIPF5Q969M3 257 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 SCLYQ96I15 445 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 ENPP5Q9UJA9 477 aa13.03□□□□□ -0.32
RERE-204ENST00000400908 SOCS6O14544 535 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 MPC1LP0DKB6 136 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 RPS26P62854 115 aaKnown RBP13.02□□□□□ -0.32
RERE-204ENST00000400908 TAGLNQ01995 201 aaKnown RBP13.02□□□□□ -0.32
RERE-204ENST00000400908 FAM182AQ5T1J6 154 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 GLB1L2Q8IW92 636 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 SLC5A8Q8N695 610 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 NKX3-1Q99801 234 aaPredicted RBP13.02□□□□□ -0.32
RERE-204ENST00000400908 SLC2A11Q9BYW1 496 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 KCNK12Q9HB15 430 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 ISYNA1Q9NPH2 558 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 ZDHHC7Q9NXF8 308 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 ANKRD36CQ5JPF3 1778 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 TRAPPC2LH3BP13 241 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 SULT1C4O75897 302 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 JUPP14923 745 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 F2RP25116 425 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 ACVRL1P37023 503 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 HNRNPA3P51991 378 aaKnown RBP13.02□□□□□ -0.32
RERE-204ENST00000400908 SUMO1P63165 101 aaKnown RBP13.02□□□□□ -0.32
RERE-204ENST00000400908 ZNF33BQ06732 778 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 TATDN3Q17R31 274 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 SLC22A6Q4U2R8 563 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 LARP4Q71RC2 724 aaKnown RBP eCLIP13.02□□□□□ -0.321e-6■■□□□ 13.1
RERE-204ENST00000400908 OSTM1Q86WC4 334 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 OR51L1Q8NGJ5 315 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 ZMYND19Q96E35 227 aaPredicted RBP13.02□□□□□ -0.32
RERE-204ENST00000400908 SLCO5A1Q9H2Y9 848 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 METTL17Q9H7H0 456 aaPredicted RBP13.02□□□□□ -0.32
RERE-204ENST00000400908 OARD1Q9Y530 152 aa13.02□□□□□ -0.32
RERE-204ENST00000400908 FAM155AB1AL88 458 aaPredicted RBP13.02□□□□□ -0.33
RERE-204ENST00000400908 OLFM2O95897 454 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 HOXB2P14652 356 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 VIPR2P41587 438 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 TAS2R38P59533 333 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 RPS15AP62244 130 aaKnown RBP13.02□□□□□ -0.33
RERE-204ENST00000400908 ACSM1Q08AH1 577 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 PROX2Q3B8N5 592 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 ACSM3Q53FZ2 586 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 C1orf220Q5T0J3 134 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 PRAMEF8Q5VWM4 474 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 PRAMEF7Q5VXH5 474 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 C22orf39Q6P5X5 142 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.33
RERE-204ENST00000400908 C1orf198Q9H425 327 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 MTHFD2LQ9H903 347 aaPredicted RBP13.02□□□□□ -0.33
RERE-204ENST00000400908 RYDENQ9NUL5 291 aaKnown RBP13.02□□□□□ -0.33
RERE-204ENST00000400908 ZNF586Q9NXT0 402 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 FBXL2Q9UKC9 423 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 TJP1Q07157 1748 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 A0A0U1RQF3 1178 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 LOC102725191A0A1B0GVB3 256 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 FAM171A2A8MVW0 826 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 PPP5D1E7EU14 171 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 HPGDSO60760 199 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 SERPINA2P20848 420 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 INCA1Q0VD86 236 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 APOOLQ6UXV4 268 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 CPOQ8IVL8 374 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 KCTD3Q9Y597 815 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 USP54Q70EL1 1684 aa13.02□□□□□ -0.33
RERE-204ENST00000400908 SDHDO14521 159 aa13.01□□□□□ -0.33
RERE-204ENST00000400908 SCAMP2O15127 329 aaKnown RBP13.01□□□□□ -0.33
RERE-204ENST00000400908 USF1P22415 310 aaPredicted RBP13.01□□□□□ -0.33
RERE-204ENST00000400908 ACKR3P25106 362 aa13.01□□□□□ -0.33
RERE-204ENST00000400908 RBMS1P29558 406 aaKnown RBP13.01□□□□□ -0.33
RERE-204ENST00000400908 CHRNEQ04844 493 aa13.01□□□□□ -0.33
RERE-204ENST00000400908 ZMAT1Q5H9K5 638 aa13.01□□□□□ -0.33
RERE-204ENST00000400908 SBSNQ6UWP8 590 aa13.01□□□□□ -0.33
RERE-204ENST00000400908 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.01□□□□□ -0.33
RERE-204ENST00000400908 PSMF1Q92530 271 aa13.01□□□□□ -0.33
RERE-204ENST00000400908 VSX1Q9NZR4 365 aaPredicted RBP13.01□□□□□ -0.33
RERE-204ENST00000400908 TEX264Q9Y6I9 313 aa13.01□□□□□ -0.33
RERE-204ENST00000400908 NRP1O14786 923 aa13.01□□□□□ -0.33
RERE-204ENST00000400908 TBX18O95935 607 aa13.01□□□□□ -0.33
RERE-204ENST00000400908 TACR3P29371 465 aa13.01□□□□□ -0.33
RERE-204ENST00000400908 GABRA4P48169 554 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms