RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 NANSQ9NR45 359 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 GLTPQ9NZD2 209 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 EXOGQ9Y2C4 368 aaKnown RBP12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 GXYLT2A0PJZ3 443 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 SMAD9O15198 467 aaKnown RBP12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 IGHA1P01876 353 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 HPGDP15428 266 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 GDNFP39905 211 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 PGDP52209 483 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 TNK1Q13470 666 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 ZNHIT3Q15649 155 aaPredicted RBP12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 TOR2AQ5JU69 321 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 LAMTOR1Q6IAA8 161 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 WDR88Q6ZMY6 472 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 RTL4Q6ZR62 310 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 C9orf62Q8N4C0 152 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 ANKRD19PQ9H560 264 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 FGF22Q9HCT0 170 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 EVA1BQ9NVM1 165 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 TRABD2BA6NFA1 517 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 CHURC1-FNTBB4DL54 471 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 ARPC1BO15143 372 aaKnown RBP12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 CPMP14384 443 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 ATF1P18846 271 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 VEGFCP49767 419 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 OC90Q02509 493 aaPredicted RBP12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 LGALS3BPQ08380 585 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 ZBTB37Q5TC79 503 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 SIGIRRQ6IA17 410 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 SAMD14Q8IZD0 417 aaPredicted RBP12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 CCL4L1Q8NHW4 92 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 SMARCD2Q92925 531 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 GAL3ST3Q96A11 431 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 C1QTNF7Q9BXJ2 289 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 MGAT4CQ9UBM8 478 aa12.48□□□□□ -0.41
RPGRIP1-202ENST00000400017 OR6C74A6NCV1 312 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 FMO6PO60774 539 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 TIMP1P01033 207 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 APODP05090 189 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 AP2S1P53680 142 aaPredicted RBP12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 BTG1P62324 171 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 EFNB1P98172 346 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 TNFRSF17Q02223 184 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 DEFB110Q30KQ9 67 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 NDUFAF6Q330K2 333 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 SMUG1Q53HV7 270 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 MFSD9Q8NBP5 474 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 HCN3Q9P1Z3 774 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 TBC1D29Q9UFV1 150 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 ADAM18Q9Y3Q7 739 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 DOCK9Q9BZ29 2069 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 ALDOBP05062 364 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 PTBP1P26599 531 aaKnown RBP eCLIP12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 HTR2AP28223 471 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 DRD3P35462 400 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 TMEM31Q5JXX7 168 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 SLITRK4Q8IW52 837 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 RFLNBQ8N5W9 214 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 SPPL3Q8TCT6 385 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 TRIM43Q96BQ3 446 aaPredicted RBP12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 KCTD12Q96CX2 325 aaKnown RBP12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 PEX11GQ96HA9 241 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 UBQLN2Q9UHD9 624 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 CEP290O15078 2479 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 POM121CA8CG34 1229 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 A8MUA0 341 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 PDGFAP04085 211 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 FCRLAQ7L513 359 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 SSX6Q7RTT6 188 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 NXPE2Q96DL1 559 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 OR2M2Q96R28 347 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 SLITRK2Q9H156 845 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 TCF7L1Q9HCS4 588 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 CMC2Q9NRP2 79 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 TAS2R10Q9NYW0 307 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 UNC80Q8N2C7 3258 aa12.47□□□□□ -0.41
RPGRIP1-202ENST00000400017 RNGTTO60942 597 aaKnown RBP12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 UBL3O95164 117 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 IFNA16P05015 189 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 HNRNPA1P09651 372 aaKnown RBP eCLIP12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 TFPIP10646 304 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 BLVRAP53004 296 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 PER3P56645 1201 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 RPS15AP62244 130 aaKnown RBP12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 RPS21P63220 83 aaKnown RBP12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 VASNQ6EMK4 673 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 FAAH2Q6GMR7 532 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 TEX261Q6UWH6 196 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 KIAA1324Q6UXG2 1013 aaKnown RBP12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 TPRA1Q86W33 373 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 OR2M4Q96R27 311 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 CNN2Q99439 309 aaKnown RBP12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 KCNJ15Q99712 375 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 KXD1Q9BQD3 176 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 HDAC8Q9BY41 377 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 NARFLQ9H6Q4 476 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 U3KQ87 197 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 H0Y8X5 98 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 ERVK-21P61565 698 aa12.46□□□□□ -0.41
RPGRIP1-202ENST00000400017 ACTC1P68032 377 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms