RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 HRKO00198 91 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ARHGEF9O43307 516 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 HRO43593 1189 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CSF2P04141 144 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 AMZ1Q400G9 498 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CNIH2Q6PI25 160 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ABI3BPQ7Z7G0 1075 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GID4Q8IVV7 300 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 VWA5B2Q8N398 1253 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 LNX2Q8N448 690 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 OR10H4Q8NGA5 316 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 DNAJA4Q8WW22 397 aaPredicted RBP16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 DEDD2Q8WXF8 326 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ATF6BQ99941 703 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 MED31Q9Y3C7 131 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 OR6C70A6NIJ9 312 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 BMP8BP34820 402 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 EMDP50402 254 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SNRPD2P62316 118 aaKnown RBP16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ACSM1Q08AH1 577 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 P2RY14Q15391 338 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 BMP8AQ7Z5Y6 402 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CDK20Q8IZL9 346 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 KISS1RQ969F8 398 aaPredicted RBP16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GSDMCQ9BYG8 508 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 KCNN2Q9H2S1 579 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FLRT3Q9NZU0 649 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 NDRG2Q9UN36 371 aaKnown RBP16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TSPAN4O14817 238 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GYPBP06028 91 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PSG6Q00889 435 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 HHEXQ03014 270 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GDPD1Q8N9F7 314 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 OR4M1Q8NGD0 313 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SENP5Q96HI0 755 aaPredicted RBP16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 HS3ST3A1Q9Y663 406 aa16.94■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PDGFAP04085 211 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 IL9P15248 144 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RABIFP47224 123 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GARNL3Q5VVW2 1013 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ZCCHC12Q6PEW1 402 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 AVL9Q8NBF6 648 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SLC7A6Q92536 515 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TOE1Q96GM8 510 aaKnown RBP16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RNF32Q9H0A6 362 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TMEM27Q9HBJ8 222 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GLTPQ9NZD2 209 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 HCN3Q9P1Z3 774 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CYP8B1Q9UNU6 501 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 DTX4Q9Y2E6 619 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 A0A0A6YYC8 382 aaPredicted RBP16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 DAPL1A0PJW8 107 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PRR23D1E9PI22 279 aaPredicted RBP16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 I3L1I5 382 aaPredicted RBP16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GNB5O14775 395 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 AKR7A2O43488 359 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RNF13O43567 381 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 NKX2-2O95096 273 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RCBTB2O95199 551 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 IGKV1D-16P01601 117 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 NGFRP08138 427 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PRR23D2P0DMB1 279 aaPredicted RBP16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ERV3-1Q14264 604 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 NNATQ16517 81 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TMPRSS11FQ6ZWK6 438 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ZFAND1Q8TCF1 268 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FN3KQ9H479 309 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CMC2Q9NRP2 79 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 BABAM2Q9NXR7 383 aa16.93■□□□□ 0.3
CHRFAM7A-202ENST00000397827 A0A1B0GWA3 101 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FAM86C2PA6NEL3 165 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 E9PI62 339 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GTPBP1O00178 669 aaKnown RBP16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PLA2G10O15496 165 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PPP1R3DO95685 299 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CTSEP14091 401 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 DRD5P21918 477 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 LTBRP36941 435 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RAB38P57729 211 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PPP3R1P63098 170 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ASAH1Q13510 395 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 NR2C2APQ86WQ0 139 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 OOSP2Q86WS3 158 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TNFRSF13CQ96RJ3 184 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TEAD3Q99594 435 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 UQCC2Q9BRT2 126 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SLC22A4Q9H015 551 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 KIR2DS5A0A0G2JLQ3 304 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 A0A0G2JNG1 304 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 B4DGG1 531 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PRAMEF26H0Y7S4 382 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TGFBR3LH3BV60 316 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 KIR2DS3K7RE56 304 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FMO6PO60774 539 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SLC35E2P0CK97 266 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 THEGLP0DJG4 465 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FAM53BQ14153 422 aa16.92■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CRMP1Q14194 572 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms