RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MKLN1Q9UL63 735 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 ICAM5Q9UMF0 924 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 LIPT1Q9Y234 373 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 WDR45Q9Y484 360 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 GPC6Q9Y625 555 aaPredicted RBP13.1□□□□□ -0.31
SEC13-208ENST00000397109 MPDZO75970 2070 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 SHISA8B8ZZ34 492 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 H0YC42 278 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 H3BNX3 289 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 KIAA0513O60268 411 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 FCMRO60667 390 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 FCGR2AP12318 317 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 PSMA4P25789 261 aaKnown RBP13.1□□□□□ -0.31
SEC13-208ENST00000397109 ELK4P28324 431 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 AGFG1P52594 562 aaKnown RBP13.1□□□□□ -0.31
SEC13-208ENST00000397109 CASP9P55211 416 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 TPD52P55327 224 aaPredicted RBP13.1□□□□□ -0.31
SEC13-208ENST00000397109 HPCAP84074 193 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 FOXF2Q12947 444 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 MYBPHQ13203 477 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 MTX3Q5HYI7 312 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 CBLN3Q6UW01 205 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 DNAJC14Q6Y2X3 702 aaPredicted RBP13.1□□□□□ -0.31
SEC13-208ENST00000397109 ESPNLQ6ZVH7 1005 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 RNF130Q86XS8 419 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 GCNT2Q8N0V5 402 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 OR52E4Q8NGH9 312 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 OR5W2Q8NH69 310 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 ARSGQ96EG1 525 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 RSRC1Q96IZ7 334 aaKnown RBP13.1□□□□□ -0.31
SEC13-208ENST00000397109 LAT2Q9GZY6 243 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 ARMC1Q9NVT9 282 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 VAPAQ9P0L0 249 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 HEATR5AQ86XA9 2040 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 DCHS2Q6V1P9 2916 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 A0A1W2PNV4 684 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 HMGN4O00479 90 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 EIF1AYO14602 144 aaKnown RBP13.09□□□□□ -0.31
SEC13-208ENST00000397109 UGT2B17O75795 530 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 CSTAP01040 98 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 GSNP06396 782 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 GPIP06744 558 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 PPIBP23284 216 aaKnown RBP13.09□□□□□ -0.31
SEC13-208ENST00000397109 KIR2DL3P43628 341 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 EIF1AXP47813 144 aaKnown RBP13.09□□□□□ -0.31
SEC13-208ENST00000397109 MVDP53602 400 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 SORDQ00796 357 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 CBFBQ13951 182 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 FGFBP1Q14512 234 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 GTDC1Q4AE62 458 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 GPAT3Q53EU6 434 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 PLXDC2Q6UX71 529 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 EIF3MQ7L2H7 374 aaKnown RBP13.09□□□□□ -0.31
SEC13-208ENST00000397109 GGNQ86UU5 652 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 SPATA24Q86W54 205 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 TMCO5AQ8N6Q1 288 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 RNF148Q8N7C7 305 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 POC1BQ8TC44 478 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 GPR119Q8TDV5 335 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 NRG4Q8WWG1 115 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 FIG4Q92562 907 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 LURAP1Q96LR2 239 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 TRNT1Q96Q11 434 aaKnown RBP13.09□□□□□ -0.31
SEC13-208ENST00000397109 TPT1P8Q9HAU6 139 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 MAGEL2Q9UJ55 1249 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 PACSIN3Q9UKS6 424 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 SLC35A3Q9Y2D2 325 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 AP4S1Q9Y587 144 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
SEC13-208ENST00000397109 LRBAP50851 2863 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 GJE1A6NN92 205 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 MSTNO14793 375 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 ADAMDEC1O15204 470 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 OIP5O43482 229 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 SYNGR4O95473 234 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 TCN1P20061 433 aaPredicted RBP13.08□□□□□ -0.32
SEC13-208ENST00000397109 SESN3P58005 492 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 LIPEQ05469 1076 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 FOXF1Q12946 379 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 PON3Q15166 354 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 RUNDC3AQ59EK9 446 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 SLC25A53Q5H9E4 307 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 TYW3Q6IPR3 259 aaKnown RBP13.08□□□□□ -0.32
SEC13-208ENST00000397109 HIPK4Q8NE63 616 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 OR2V1Q8NHB1 315 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 FNDC9Q8TBE3 224 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 FAM222BQ8WU58 562 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 PMM1Q92871 262 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 ZNF845Q96IR2 970 aaPredicted RBP13.08□□□□□ -0.32
SEC13-208ENST00000397109 ADGRG7Q96K78 797 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 MRGPRX4Q96LA9 322 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 ZNF184Q99676 751 aaPredicted RBP13.08□□□□□ -0.32
SEC13-208ENST00000397109 NPAS1Q99742 590 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 KCTD14Q9BQ13 255 aaPredicted RBP13.08□□□□□ -0.32
SEC13-208ENST00000397109 KLHDC3Q9BQ90 382 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 SLC39A3Q9BRY0 314 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 RBM24Q9BX46 236 aaKnown RBP13.08□□□□□ -0.32
SEC13-208ENST00000397109 PRRG4Q9BZD6 226 aa13.08□□□□□ -0.32
SEC13-208ENST00000397109 KLHL4Q9C0H6 718 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms